MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-87-P1l

Family name MIR-87 (all species)
Seed AGCCCGG
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P2k  Csc-Mir-87-P2l 
Orthologues Bge-Mir-87-P1  Cbr-Mir-87-o1  Cel-Mir-87-o1  Cte-Mir-87-P1  Dgr-Mir-87-P1  Dlo-Mir-87-P1  Gsp-Mir-87  Hru-Mir-87-P1  Isc-Mir-87-P1  Lan-Mir-87-P1  Lgi-Mir-87-P1  Mgi-Mir-87-P1  Ofu-Mir-87-P1  Pau-Mir-87-P1  Pve-Mir-87-P1  Sne-Mir-87  Snu-Mir-87-P1  Tca-Mir-87-P1 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384506.1: 706723-706782 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAUACUUUUCCAGUUGUGAAGUUCUGGCGAGCCCGGAACUUUGCCUCAACCUGACAAAACAGACAGGUGAGCAAAGUUUCAGGUGUGUUGGAUCUUCAAAUAGUCUCCAUUUUCUAUG
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Structure
        10          20        30        40        50        60
AAAAUACUUUUCCAGUUG--|    U  UG   A   C          C   A   GACAA 
                    UGAAG UC  GCG GCC GGAACUUUGC UCA CCU     A
                    ACUUC AG  UGU UGG CUUUGAAACG AGU GGA     A
GUAUCUUUUACCUCUGAUAA^    U  GU   G   A          -   -   CAGAC 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-87-P1l_5p
mirBase accessionNone
Sequence 
0- GAGCCCGGAACUUUGCCUCAACCU -24
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Star sequence

Csc-Mir-87-P1l_3p*
mirBase accessionNone
Sequence 
38- GUGAGCAAAGUUUCAGGUGUGU -60
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