MirGeneDB 2.1
MirGeneDB ID

Csc-Mir-87-P2k

Family name MIR-87 (all species)
Seed UGAGCAA
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-87-P1k1  Csc-Mir-87-P1k2  Csc-Mir-87-P1l  Csc-Mir-87-P2l 
Orthologues Aae-Mir-87-P2  Cbr-Mir-87-o2  Cel-Mir-87-o2  Cgi-Mir-87-P2  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Hme-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384773.1: 171965-172023 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCGAUGAAGAUAUUUGAAUUACCUUUCCUUACACCUGAAAGGUUGUCUCAACCUUGUAAAUGGAUGGGUGAGCAAGGUUUCAGGUGUGUGGAUGGAAAAAAGAAACAAACCGAAAAGAU
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Structure
        10        20           30        40        50          
UCGAUGAAGAUAUUUGAAUUA---| UU   U           GG   U    A   UGUAA 
                        CC  UCC UACACCUGAAA  UUG CUCA CCU     \
                        GG  AGG GUGUGGACUUU  AAC GAGU GGG     A
UAGAAAAGCCAAACAAAGAAAAAA^ U-   U           GG   -    -   UAGGU 
       110       100         90        80         70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-87-P2k_5p*
mirBase accessionNone
Sequence 
0- ACACCUGAAAGGUUGUCUCAACCU -24
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Mature sequence

Csc-Mir-87-P2k_3p
mirBase accessionNone
Sequence 
37- GUGAGCAAGGUUUCAGGUGUGU -59
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