MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-87-P2

Family name MIR-87 (all species)
Seed UGAGCAA
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID hme-mir-87
Paralogues
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Gpa-Mir-87-P2-v1  Gpa-Mir-87-P2-v2  Gsp-Mir-87  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Pve-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Hmel_1)		 HE668834: 53115-53175 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAAUAAAGAAGAAGUUUGGUACACUGAUGGGCCUGAACUGUUGCUCUUACCUGUUCUUUUAUACUAGGUGAGCAAACUUUCAGGUGUGUUAGUGCCGGCUGUUCAUCAUGGAAGAGGUU
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Structure
        10            20        30        40        50        60 
AAGAAUAAAGAAGAAGU----|   UA        G       CUG      UU    GUUCUU 
                     UUGG  CACUGAUG GCCUGAA   UUGCUC  ACCU      \
                     GGCC  GUGAUUGU UGGACUU   AACGAG  UGGA      U
UUGGAGAAGGUACUACUUGUC^   --        G       UCA      --    UCAUAU 
 .       110       100          90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-87-P2_5p*
mirBase accessionNone
Sequence 
0- GGGCCUGAACUGUUGCUCUUACCU -24
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Mature sequence

Hme-Mir-87-P2_3p
mirBase accessionMIMAT0024989
Sequence 
39- GUGAGCAAACUUUCAGGUGUGU -61
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