MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-87-P2

Family name MIR-87 (all species)
Seed UGAGCAA
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues Pve-Mir-87-P1 
Orthologues Aae-Mir-87-P2  Aga-Mir-87-P2  Bge-Mir-87-P2a  Bge-Mir-87-P2b  Cbr-Mir-87-o2  Cel-Mir-87-o2  Csc-Mir-87-P2k  Csc-Mir-87-P2l  Cte-Mir-87-P2  Dan-Mir-87-P2-v1  Dan-Mir-87-P2-v2  Dgr-Mir-87-P2  Dlo-Mir-87-P2  Dme-Mir-87-P2-v1  Dme-Mir-87-P2-v2  Dmo-Mir-87-P2-v1  Dmo-Mir-87-P2-v2  Dsi-Mir-87-P2-v1  Dsi-Mir-87-P2-v2  Dya-Mir-87-P2-v1  Dya-Mir-87-P2-v2  Gpa-Mir-87-P2-v1  Gpa-Mir-87-P2-v2  Gsp-Mir-87  Hme-Mir-87-P2  Hru-Mir-87-P2  Isc-Mir-87-P2  Lan-Mir-87-P2  Lpo-Mir-87-P2c  Lpo-Mir-87-P2d  Lpo-Mir-87-P2e  Lpo-Mir-87-P2f  Lpo-Mir-87-P2g  Lpo-Mir-87-P2h  Lpo-Mir-87-P2i  Lpo-Mir-87-P2j  Mgi-Mir-87-P2  Ofu-Mir-87-P2  Pau-Mir-87-P2  Sne-Mir-87  Snu-Mir-87-P2  Tca-Mir-87-P2 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(PVE_manual_microRNAloci)		 CM062288.1:171018407-171018665: 101-159 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAGUUAUGAGGCUGUCAAGCUUUUGUGAACGUGCCUGACAUUUUGGCUCUAACCUGUCGAAUAAAAGGUGAGCAAAGUUUCAGGUAUGUUCAAGGAAGACUUUUUCAUCAACAACAAGG
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Structure
        10          20        30        40        50        60
UAGUUAUGAGGCUGUCA-  -|   UG             C      G   UA    GUCG 
                  AG CUUU  UGAACGUGCCUGA AUUUUG CUC  ACCU    A
                  UC GAAG  ACUUGUAUGGACU UGAAAC GAG  UGGA    A
GGAACAACAACUACUUUU  A^   GA             U      -   --    AAAU 
       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Pve-Mir-87-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GUGCCUGACAUUUUGGCUCUAACCU -25
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Mature sequence

Pve-Mir-87-P2_3p
mirBase accessionNone
Sequence 
37- GUGAGCAAAGUUUCAGGUAUGU -59
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