MirGeneDB 3.0

97 Pictodentalium vernedei microRNA genes
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC To
Pve-Bantam None BANTAM GAGAUCA None None CM062297.1:419251053-419251311 101 159 + Protostomia Protostomia No 1 1
Pve-Let-7 None LET-7 GAGGUAG None None CM062288.1:208560784-208561052 101 169 + Bilateria Bilateria No 1
Pve-Mir-1-P27 None MIR-1 GGAAUGU None None CM062291.1:267155002-267155261 101 160 + Dentaliidae Bilateria No 1 1
Pve-Mir-1-P28 None MIR-1 GGAAUGU None None CM062290.1:454114149-454114408 101 160 + Dentaliidae Bilateria No 1
Pve-Mir-2-o74-v1 None MIR-2 AUCACAG None None CM062295.1:484570088-484570348 102 161 - Dentaliidae Protostomia No 1 1
Pve-Mir-2-o74-v2 None MIR-2 CACAGCC None None CM062295.1:484570088-484570348 101 161 - Dentaliidae Protostomia No 1 1
Pve-Mir-2-o75-v1 None MIR-2 AUCACAG None None CM062295.1:484566263-484566525 101 163 - Dentaliidae Protostomia No 1 1
Pve-Mir-2-o75-v2 None MIR-2 CACAGCC None None CM062295.1:484566263-484566525 101 163 - Dentaliidae Protostomia No 1
Pve-Mir-2-P12 None MIR-2 AUCACAG None None CM062295.1:484566395-484566654 101 160 - Lophotrochozoa Protostomia No
Pve-Mir-2-o76-v1 None MIR-2 AUCACAG None None CM062295.1:484550445-484550703 101 159 - Dentaliidae Protostomia No 1
Pve-Mir-2-o76-v2 None MIR-2 CACAGCC None None CM062295.1:484550445-484550703 101 159 - Dentaliidae Protostomia No 1 1
Pve-Mir-2-o77 None MIR-2 AUCACAG None None CM062295.1:484550274-484550531 101 158 - Dentaliidae Protostomia No 1
Pve-Mir-2-o78-v1 None MIR-2 AUCACAG None None CM062295.1:484544506-484544763 101 158 - Dentaliidae Protostomia No 1
Pve-Mir-2-o78-v2 None MIR-2 CACAGCC None None CM062295.1:484544506-484544763 101 158 - Dentaliidae Protostomia No 1
Pve-Mir-2-o79 None MIR-2 AUCACAG None None CM062295.1:484544123-484544380 101 158 - Dentaliidae Protostomia No 1
Pve-Mir-7 None MIR-7 GGAAGAC None None CM062293.1:180711710-180711970 101 161 + Bilateria Bilateria No 1
Pve-Mir-8 None MIR-8 AAUACUG None None CM062290.1:151354496-151354759 101 164 + Nephrozoa Nephrozoa No 1
Pve-Mir-9 None MIR-9 CUUUGGU None None CM062293.1:438755399-438755659 101 161 + Bilateria Bilateria No 1
Pve-Mir-10-P1 None MIR-10 ACCCUGU None None CM062289.1:342995272-342995529 101 158 - Bilateria Eumetazoa No 1
Pve-Mir-10-P2 None MIR-10 ACCCGUA None None CM062288.1:208545187-208545443 101 157 + Bilateria Eumetazoa No
Pve-Mir-10-P3 None MIR-10 CCCUGAG None None CM062288.1:208590697-208590951 101 155 + Bilateria Eumetazoa Unknown 1
Pve-Mir-10-P5 None MIR-10 UACCCUG None None CM062289.1:344002716-344002974 101 159 - Lophotrochozoa Eumetazoa Unknown 1
Pve-Mir-10-P6 None MIR-10 UUACCCU None None CM062289.1:404383635-404383893 101 159 - Neotrochozoa Eumetazoa No 1 1
Pve-Mir-12 None MIR-12 GAGUAUU None None CM062292.1:380934177-380934433 101 157 - Protostomia Protostomia Unknown 1 1
Pve-Mir-22-P1 None MIR-22 GCUGCCU None None CM062294.1:236426419-236426676 101 158 - Bilateria Bilateria No 1 1
Pve-Mir-22-P2 None MIR-22 AGCUGCC None None CM062294.1:236402367-236402629 101 163 - Bilateria Bilateria No 1
Pve-Mir-29-P1 None MIR-29 AGCACCA None None CM062296.1:771270067-771270327 101 161 + Bilateria Bilateria No 1
Pve-Mir-29-P2 None MIR-29 AGCACCA None None CM062296.1:771278504-771278760 101 157 + Bilateria Bilateria No 1
Pve-Mir-31 None MIR-31 GGCAAGA None None CM062293.1:538205284-538205544 101 161 + Bilateria Bilateria No 1
Pve-Mir-33-P17a None MIR-33 UGCAUUG None None CM062297.1:10269390-10269648 101 159 - Dentaliidae Bilateria No 1 1
Pve-Mir-33-P17b None MIR-33 UGCAUUG None None CM062297.1:10499023-10499281 101 159 - Dentaliidae Bilateria No 1 1
Pve-Mir-34 None MIR-34 GGCAGUG None None CM062288.1:328118193-328118451 101 159 - Bilateria Bilateria No 1
Pve-Mir-36 None MIR-36 CACCGGG None None CM062291.1:175790031-175790289 101 159 - Protostomia Protostomia Unknown 1
Pve-Mir-67-v1 None MIR-67 CACAACC None None CM062294.1:269709884-269710141 101 158 - Protostomia Protostomia No 1
Pve-Mir-67-v2 None MIR-67 ACAACCU None None CM062294.1:269709884-269710141 100 159 - Protostomia Protostomia No
Pve-Mir-71 None MIR-71 GAAAGAC None None CM062295.1:484570328-484570586 101 159 - Nephrozoa Nephrozoa No 1 1
Pve-Mir-76 None MIR-76 UCGUUGU None None CM062297.1:643243928-643244187 101 160 - Nephrozoa Nephrozoa No 1
Pve-Mir-87-P1 None MIR-87 UGAGCAA None None CM062288.1:171049914-171050172 101 159 - Protostomia Protostomia No 1 1
Pve-Mir-87-P2 None MIR-87 UGAGCAA None None CM062288.1:171018407-171018665 101 159 - Protostomia Protostomia No 1
Pve-Mir-92-o98 None MIR-92 AUUGCAC None None CM062292.1:212134836-212135093 101 158 + Dentaliidae Bilateria No
Pve-Mir-92-o99 None MIR-92 AUUGCAC None None CM062292.1:212132735-212132994 101 160 + Dentaliidae Bilateria No 1
Pve-Mir-92-o100 None MIR-92 AUUGCAC None None CM062292.1:212132284-212132541 101 158 + Dentaliidae Bilateria No 1
Pve-Mir-92-o101 None MIR-92 AUUGCAC None None CM062292.1:212132107-212132364 101 158 + Dentaliidae Bilateria No 1
Pve-Mir-92-o102 None MIR-92 AUUGCAC None None CM062292.1:212004109-212004370 101 162 + Dentaliidae Bilateria No 1
Pve-Mir-96-P1h None MIR-96 UUGGCAC None None CM062296.1:511371287-511371545 101 159 - Mollusca Bilateria No 1 1
Pve-Mir-96-P1i None MIR-96 UUUGGCA None None CM062293.1:164055559-164055815 101 157 - Mollusca Bilateria No 1
Pve-Mir-96-P2 None MIR-96 UUGGCAC None None CM062296.1:811546847-811547104 101 158 + Bilateria Bilateria No
Pve-Mir-96-P3 None MIR-96 AUGGCAC None None CM062296.1:811517833-811518091 101 159 + Bilateria Bilateria No 1
Pve-Mir-124 None MIR-124 AAGGCAC None None CM062293.1:106357558-106357814 101 157 - Bilateria Bilateria No 1
Pve-Mir-133 None MIR-133 UGGUCCC None None CM062291.1:267242057-267242318 101 162 + Bilateria Bilateria No 1 1
Pve-Mir-137 None MIR-137 UAUUGCU None None CM062293.1:226206935-226207190 101 156 + Bilateria Bilateria No 1
Pve-Mir-153 None MIR-153 UGCAUAG None None CM062288.1:197398265-197398522 101 158 + Bilateria Bilateria No 1 1
Pve-Mir-184 None MIR-184 GGACGGA None None CM062292.1:62101174-62101430 101 157 - Nephrozoa Nephrozoa No 1
Pve-Mir-190 None MIR-190 GAUAUGU None None CM062292.1:371410136-371410396 101 161 + Bilateria Bilateria No 1 1
Pve-Mir-193-P1 None MIR-193 ACUGGCC None None CM062297.1:245647784-245648042 101 159 + Bilateria Bilateria No
Pve-Mir-193-P2 None MIR-193 GGGAUUU None None CM062297.1:245833870-245834128 101 159 + Bilateria Bilateria No
Pve-Mir-216-P1 None MIR-216 AAUAUCA None None CM062292.1:380949573-380949832 101 160 - Nephrozoa Nephrozoa No
Pve-Mir-216-P2d None MIR-216 AAUCUCA None None CM062292.1:380938939-380939199 101 161 - Lophotrochozoa Nephrozoa No 1 1
Pve-Mir-219 None MIR-219 GAACUGU None None CM062291.1:115967413-115967670 101 158 + Bilateria Bilateria No 1 1
Pve-Mir-242-P5 None MIR-242 UGCGUAG None None CM062296.1:281370793-281371048 101 156 + Dentaliidae Nephrozoa Unknown 1
Pve-Mir-242-P6 None MIR-242 UGCGUAG None None CM062296.1:281369314-281369571 101 158 + Dentaliidae Nephrozoa Unknown
Pve-Mir-252-P2 None MIR-252 UAAGUAC None None CM062295.1:529354767-529355023 101 157 + Bilateria Bilateria No 1
Pve-Mir-277 None MIR-277 AAAUGCA None None CM062288.1:328149529-328149786 101 158 - Protostomia Protostomia No 1 1
Pve-Mir-278 None MIR-278 CGGUGGG None None CM062294.1:90257706-90257964 101 159 + Bilateria Bilateria No 1
Pve-Mir-279 None MIR-279 GACUAGA None None CM062291.1:175833494-175833751 101 158 - Protostomia Protostomia No 1
Pve-Mir-281-P19 None MIR-281 GUCAUGG None None CM062289.1:249398414-249398670 101 157 - Dentaliidae Nephrozoa No 1
Pve-Mir-281-P20 None MIR-281 GUCAUGG None None CM062289.1:249386302-249386560 101 159 - Dentaliidae Nephrozoa No 1
Pve-Mir-281-P21a None MIR-281 GUCAUGG None None CM062289.1:249376755-249377011 101 157 - Dentaliidae Nephrozoa No 1
Pve-Mir-281-P21b None MIR-281 GUCAUGG None None CM062289.1:249373539-249373795 101 157 - Dentaliidae Nephrozoa No 1
Pve-Mir-315 None MIR-315 UUUGAUU None None CM062296.1:811790869-811791128 101 160 - Nephrozoa Nephrozoa No
Pve-Mir-317 None MIR-317 GAACACA None None CM062288.1:328172886-328173146 101 161 - Protostomia Protostomia No 1 1
Pve-Mir-375 None MIR-375 UUGUUCG None None CM062288.1:18040866-18041121 101 156 + Nephrozoa Nephrozoa No 1
Pve-Mir-750 None MIR-750 CAGAUCU None None CM062293.1:163502176-163502439 101 164 - Protostomia Protostomia No 1 1
Pve-Mir-1175 None MIR-1175 GAGAUUC None None CM062293.1:163479013-163479276 101 164 - Protostomia Protostomia No 1
Pve-Mir-1984-P1 None MIR-1984 GCCCUAU None None CM062290.1:154061225-154061483 101 159 + Gastropoda + Bivalvia + Scaphopoda Conchifera No 1
Pve-Mir-1984-P2 None MIR-1984 GCCAUUU None None CM062290.1:154063338-154063593 101 156 + Gastropoda + Bivalvia + Scaphopoda Conchifera No 1
Pve-Mir-1986-P3 None MIR-1986 GGAUUUC None None CM062289.1:443542560-443542819 101 160 - Dentaliidae Lophotrochozoa Unknown 1
Pve-Mir-1986-P4 None MIR-1986 GGAUUUC None None CM062289.1:352801864-352802122 101 159 - Dentaliidae Lophotrochozoa Unknown
Pve-Mir-1986-P5 None MIR-1986 GGAUUUC None None CM062289.1:352801186-352801443 101 158 - Dentaliidae Lophotrochozoa Unknown 1
Pve-Mir-1989 None MIR-1989 CAGCUGU None None CM062289.1:256164386-256164643 101 158 + Platytrochozoa Platytrochozoa Unknown 1 1
Pve-Mir-1990-P2a1 None MIR-1990 GGGACUA None None CM062289.1:443548010-443548266 101 157 - Dentaliidae Lophotrochozoa No 1 1
Pve-Mir-1990-P2a2 None MIR-1990 GGGACUA None None CM062289.1:443228928-443229184 101 157 - Dentaliidae Lophotrochozoa No 1 1
Pve-Mir-1990-P2b None MIR-1990 GGGACUA None None CM062289.1:352803636-352803891 101 156 - Dentaliidae Lophotrochozoa No
Pve-Mir-1990-P2c None MIR-1990 AGGACUA None None CM062289.1:352802959-352803215 101 157 - Dentaliidae Lophotrochozoa No 1 1
Pve-Mir-1990-P2d None MIR-1990 GUAAGUU None None CM062289.1:352800122-352800378 101 157 - Dentaliidae Lophotrochozoa No 1
Pve-Mir-1990-P2e None MIR-1990 GUAAGUU None None CM062289.1:352797996-352798254 101 159 - Dentaliidae Lophotrochozoa No
Pve-Mir-1992 None MIR-1992 CAGCAGU None None CM062294.1:307636420-307636681 101 162 - Platytrochozoa Platytrochozoa No 1
Pve-Mir-1993-P8 None MIR-1993 AUUAUGC None None CM062291.1:263611980-263612237 101 158 + Dentaliidae Protostomia No 1 1
Pve-Mir-1993-P9 None MIR-1993 AUUAUGC None None CM062291.1:263615514-263615771 101 158 + Dentaliidae Protostomia No
Pve-Mir-1994-P1 None MIR-1994 GAGACAG None None CM062290.1:123318688-123318948 101 161 - Mollusca Lophotrochozoa No 1
Pve-Mir-1994-P2a None MIR-1994 GAGACAG None None CM062290.1:123318360-123318615 101 156 - Dentaliidae Lophotrochozoa No 1
Pve-Mir-1994-P2b None MIR-1994 GAGACAG None None CM062290.1:123307701-123307959 101 159 - Dentaliidae Lophotrochozoa No
Pve-Mir-2001 None MIR-2001 UGUGACC None None CM062295.1:529343410-529343668 101 159 + Bilateria Bilateria Unknown 1 1
Pve-Mir-2722 None MIR-2722 GAGAUGU None None CM062297.1:853912226-853912483 101 158 - Mollusca Mollusca No 1
Pve-Novel-1 None PVE-NOVEL-1 GAGGUAG None None CM062288.1:206768251-206768509 101 159 + Dentaliidae Dentaliidae No 1
Pve-Novel-2 None PVE-NOVEL-2 UUGCUCA None None CM062288.1:273121784-273122043 101 160 + Dentaliidae Dentaliidae No 1
Pve-Novel-3 None PVE-NOVEL-3 AAUACCC None None CM062292.1:26143875-26144135 101 161 - Dentaliidae Dentaliidae No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix