| MirGeneDB ID | Pve-Novel-3 |
|---|
| Family name |
PVE-NOVEL-3 (all species) |
|---|
| Seed |
AAUACCC |
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| Species |
Vernerds tusk shell (Pictodentalium vernedei) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
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| Node of Origin (locus) |
Dentaliidae
|
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| Node of Origin (family) |
Dentaliidae
|
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Genome context
(PVE_manual_microRNAloci) |
CM062292.1:26143875-26144135: 101-161 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
ACAGCCGUGAAAUUUGAAGAUAAAUCCAGCUCCUCGAUGUCUUGCGUAUCUCUGAUAAUAAAGGCUAUCAAAUACCCUGAUAUCGUAGACCUGGAGAAACUAUUCAACAAUCAAGAUCUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
ACAGCCGUGAAAUUUGAAGAUAAA--| C CU UUGC CUC UAAUA
UCCAG UC CGAUGUC GUAU UGA A
AGGUC AG GCUAUAG CAUA ACU A
CUUCUAGAACUAACAACUUAUCAAAG^ C AU UCC- A-- AUCGG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Star sequence |
Pve-Novel-3_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- UCCUCGAUGUCUUGCGUAUCUCUGA -25
Get sequence
|
|---|
| Mature sequence |
Pve-Novel-3_3p |
| mirBase accession | None |
|---|
| Sequence |
39- AAAUACCCUGAUAUCGUAGACC -61
Get sequence
|
|---|
