MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-1992

Family name MIR-1992 (all species)
Seed CAGCAGU
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Eba-Mir-1992  Efe-Mir-1992-P3  Efe-Mir-1992-P4  Egr-Mir-1992  Esc-Mir-1992  Gsa-Mir-1992  Hru-Mir-1992  Lan-Mir-1992  Lgi-Mir-1992-P1  Lgi-Mir-1992-P2  Llo-Mir-1992  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ofu-Mir-1992  Ovu-Mir-1992  Pau-Mir-1992  Pcr-Mir-1992  Pdu-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Sme-Mir-1992-P5  Sme-Mir-1992-P6-v1  Sme-Mir-1992-P6-v2  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(PVE_manual_microRNAloci)		 CM062294.1:307636420-307636681: 101-162 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGUUUGUCUACUAACAUACAACUUUUGGUGCAUCAGUGGUUGAUUGCUAGGUACCUCAGGUUAUAAGUAUCAGCAGUUGUACCACUGAUUUGCUAACUGUUGACUUAACAGCAUGCUUUGAC
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Structure
        10          20        30        40         50        60
UGUUUGUCUACUAACAUA--    UU      C         -|       A    CCUCAG 
                    CAAC  UUGGUG AUCAGUGGU UGAUUGCU GGUA      G
                    GUUG  AAUCGU UAGUCACCA GUUGACGA CUAU      U
CAGUUUCGUACGACAAUUCA    UC      U         U^       -    GAAUAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Pve-Mir-1992_5p*
mirBase accessionNone
Sequence 
0- CAUCAGUGGUUGAUUGCUAGGUA -23
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Mature sequence

Pve-Mir-1992_3p
mirBase accessionNone
Sequence 
39- UCAGCAGUUGUACCACUGAUUUG -62
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