MirGeneDB 3.0
MirGeneDB ID

Eba-Mir-1992

Family name MIR-1992 (all species)
Seed CAGCAGU
Species Epimenia (Solenogaster) (Epimenia babai)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Efe-Mir-1992-P3  Efe-Mir-1992-P4  Egr-Mir-1992  Esc-Mir-1992  Gsa-Mir-1992  Hru-Mir-1992  Lan-Mir-1992  Lgi-Mir-1992-P1  Lgi-Mir-1992-P2  Llo-Mir-1992  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ofu-Mir-1992  Ovu-Mir-1992  Pau-Mir-1992  Pcr-Mir-1992  Pdu-Mir-1992  Pve-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Sme-Mir-1992-P5  Sme-Mir-1992-P6-v1  Sme-Mir-1992-P6-v2  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(GCA_011762755.2_ASM1176275v2_Epimenia)		 WURV02157674.1: 2512-2572 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGAUUUCAGGAAGACUGCACUCUUGACAUGUCAGUGGUCGACGGCUAGUAUGUGACAUGAGCAGUAUCAGCAGUUGUACCACUGAUUUGUAAAGUCUGCAUGAAUCAACACACCACUCC
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Structure
        10          20        30        40         50         
AUUGAUUUCAGGAAGAC--    CU   G   U         -|   G   A   UGUGAC 
                   UGCA  CUU ACA GUCAGUGGU CGAC GCU GUA      A
                   ACGU  GAA UGU UAGUCACCA GUUG CGA UAU      U
CCUCACCACACAACUAAGU    CU   A   U         U^   A   C   GACGAG 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ch
Star sequence

Eba-Mir-1992_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGUCAGUGGUCGACGGCUAGUA -22
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Mature sequence

Eba-Mir-1992_3p
mirBase accessionNone
Sequence 
38- UCAGCAGUUGUACCACUGAUUUG -61
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