MirGeneDB 3.0
MirGeneDB ID

Esc-Mir-1992

Family name MIR-1992 (all species)
Seed CAGCAGU
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Eba-Mir-1992  Efe-Mir-1992-P3  Efe-Mir-1992-P4  Egr-Mir-1992  Gsa-Mir-1992  Hru-Mir-1992  Lan-Mir-1992  Lgi-Mir-1992-P1  Lgi-Mir-1992-P2  Llo-Mir-1992  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ofu-Mir-1992  Ovu-Mir-1992  Pau-Mir-1992  Pcr-Mir-1992  Pdu-Mir-1992  Pve-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Sme-Mir-1992-P5  Sme-Mir-1992-P6-v1  Sme-Mir-1992-P6-v2  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(GCA_004765925.1_miRNA_LOCI)		 Esc-Mir-1992_pre_SRIE01000948.1:3222342-3222480: 39-101 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UACGUUUUACUUGUGCCGUUCUUCCCAGUCCGUCAGUGGAUGAUUGCUGGUAGUCUAGUCUGAUACUUUAUCAGCAGUUGUACCACUGAUUUGCUGUGUGGAAUUAUUUCAUCUCCACCGAAA
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Structure
        10          20        30         40        50        60
UACGUUUUACUUGUGCC--     UCC    CC        -|UG          GUCUAGU 
                   GUUCU   CAGU  GUCAGUGG A  AUUGCUGGUA       C
                   UAAGG   GUCG  UAGUCACC U  UGACGACUAU       U
AAAGCCACCUCUACUUUAU     UGU    UU        A^GU          UUCAUAG 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Li
Star sequence

Esc-Mir-1992_5p*
mirBase accessionNone
Sequence 
0- CGUCAGUGGAUGAUUGCUGGUA -22
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Mature sequence

Esc-Mir-1992_3p
mirBase accessionNone
Sequence 
40- UCAGCAGUUGUACCACUGAUUUG -63
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