MirGeneDB 3.0
MirGeneDB ID

Ofu-Mir-1992

Family name MIR-1992 (all species)
Seed CAGCAGU
Species tubeworm (Owenia fusiformis)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Eba-Mir-1992  Efe-Mir-1992-P3  Efe-Mir-1992-P4  Egr-Mir-1992  Esc-Mir-1992  Gsa-Mir-1992  Hru-Mir-1992  Lan-Mir-1992  Lgi-Mir-1992-P1  Lgi-Mir-1992-P2  Llo-Mir-1992  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ovu-Mir-1992  Pau-Mir-1992  Pcr-Mir-1992  Pdu-Mir-1992  Pve-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Sme-Mir-1992-P5  Sme-Mir-1992-P6-v1  Sme-Mir-1992-P6-v2  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(GCA_903813345.2_Owenia)		 CAIIXF020000007.1: 19293990-19294047 [-]
Precursor
(pre-Mir +30nt flank)
UCUUCUGGAUUACACUGUAUUCUGACUGUUCAUUGGUGGAUAAUUGCUGGUAGUAUUUUAUCAUAUCAGCAGUUGUACCACUGAUGGGUAGUUGGGAAACUAACAACAAAAUCACAAC
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Structure
        10          20        30         40        50        
UCUUCUGGAUUACACUGUA--   UG    UU   UG    -|            GUAUU 
                     UUC  ACUG  CAU  GUGG AUAAUUGCUGGUA     \
                     AGG  UGAU  GUA  CACC UGUUGACGACUAU     U
CAACACUAAAACAACAAUCAA   GU    GG   GU    A^            ACUAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ow Ow
Star sequence

Ofu-Mir-1992_5p*
mirBase accessionNone
Sequence 
0- CAUUGGUGGAUAAUUGCUGGUA -22
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Mature sequence

Ofu-Mir-1992_3p
mirBase accessionNone
Sequence 
35- UCAGCAGUUGUACCACUGAUGGG -58
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