MirGeneDB 3.0
MirGeneDB ID

Hru-Mir-1992

Family name MIR-1992 (all species)
Seed CAGCAGU
Species Red Abalone (Haliotis rufescens)
MiRBase ID
Paralogues
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Eba-Mir-1992  Efe-Mir-1992-P3  Efe-Mir-1992-P4  Egr-Mir-1992  Esc-Mir-1992  Gsa-Mir-1992  Lan-Mir-1992  Lgi-Mir-1992-P1  Lgi-Mir-1992-P2  Llo-Mir-1992  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ofu-Mir-1992  Ovu-Mir-1992  Pau-Mir-1992  Pcr-Mir-1992  Pdu-Mir-1992  Pve-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Sme-Mir-1992-P5  Sme-Mir-1992-P6-v1  Sme-Mir-1992-P6-v2  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(GCA_023055435.1_xgHalRufe1.0.p_genomic_plus_traces)		 JALGQA010000004.1: 53166576-53166639 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCUCCAGUACCAUGAGGUCCUUGUGUCGAGUCAGUGGCUGACUGCUUGGAUAUCUUCCAACACAGUAUAUCAGCAGUUGUACCACUGAUUUGACAAGGGGAUGCCUAACAUCGGUACCAGCA
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Structure
        10          20        30        40         50        60  
CUUCUCCAGUACCAUGAG--     UG              CU-|      UG    UCUUCCA 
                    GUCCU  UGUCGAGUCAGUGG   GACUGCU  GAUA       \
                    UAGGG  ACAGUUUAGUCACC   UUGACGA  CUAU       A
ACGACCAUGGCUACAAUCCG     GA              AUG^      --    AUGACAC 
  120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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Star sequence

Hru-Mir-1992_5p*
mirBase accessionNone
Sequence 
0- AGUCAGUGGCUGACUGCUUGGAUA -24
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Mature sequence

Hru-Mir-1992_3p
mirBase accessionNone
Sequence 
41- UCAGCAGUUGUACCACUGAUUUG -64
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