MirGeneDB 3.0
MirGeneDB ID

Pcr-Mir-1992

Family name MIR-1992 (all species)
Seed CAGCAGU
Species Tiger flatworm (Prostheceraeus crozieri )
MiRBase ID
Paralogues
Orthologues Agr-Mir-1992  Cte-Mir-1992  Dgr-Mir-1992  Eba-Mir-1992  Efe-Mir-1992-P3  Efe-Mir-1992-P4  Egr-Mir-1992  Esc-Mir-1992  Gsa-Mir-1992  Hru-Mir-1992  Lan-Mir-1992  Lgi-Mir-1992-P1  Lgi-Mir-1992-P2  Llo-Mir-1992  Mgi-Mir-1992  Mom-Mir-1992  Npo-Mir-1992  Obi-Mir-1992  Ofu-Mir-1992  Ovu-Mir-1992  Pau-Mir-1992  Pdu-Mir-1992  Pve-Mir-1992  Rph-Mir-1992  Sma-Mir-1992  Sme-Mir-1992-P5  Sme-Mir-1992-P6-v1  Sme-Mir-1992-P6-v2  Snu-Mir-1992  War-Mir-1992 
Node of Origin (locus) Platytrochozoa
Node of Origin (family) Platytrochozoa
Genome context
(GCA_907163375.1_PROCRO_GENOME_genomic)		 CAJQUW010011562.1: 46557-46616 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAAAGUGUCGAAAUUUCAGUAGUUGUGUCCAGUCAGUGGUCUGCUGCUUGUUAGUGACCAAUGUCUAUCAGCAGUUGUACCACUGAUGUGAUCUCUACUGUCAGUCAUCUCUUCACCGCU
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Structure
        10            20        30        40         50         
UAAAGUGUCGAAAUUUC----|    UUGU   CA         CU-      U  UAGUGAC 
                     AGUAG    GUC  GUCAGUGGU   GCUGCU GU       \
                     UCAUC    UAG  UAGUCACCA   UGACGA UA       C
UCGCCACUUCUCUACUGACUG^    UC--   UG         UGU      C  UCUGUAA 
.       110       100          90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Pcr-Mir-1992_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUCAGUGGUCUGCUGCUUGUUA -23
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Mature sequence

Pcr-Mir-1992_3p
mirBase accessionNone
Sequence 
37- UCAGCAGUUGUACCACUGAUGUG -60
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