MirGeneDB 3.0
MirGeneDB ID

Pve-Mir-252-P2

Family name MIR-252 (all species)
Seed UAAGUAC
Species Vernerds tusk shell (Pictodentalium vernedei)
MiRBase ID
Paralogues
Orthologues Aae-Mir-252-P2  Aga-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Csc-Mir-252-P2k  Csc-Mir-252-P2l-v1  Csc-Mir-252-P2l-v2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dlo-Mir-252-P2  Dma-Mir-252-P2-v1  Dma-Mir-252-P2-v2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Hru-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Llo-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pau-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Tur-Mir-252-P2-v1  Tur-Mir-252-P2-v2  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(PVE_manual_microRNAloci)		 CM062295.1:529354767-529355023: 101-157 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAGAGAAAGAUUUGAGCUCAAUAACUUUACUAAGUACUGGUGCCGCGGGAUGUUGAUAUGAGCUCCUGCGUUUCCGGUACUUACUGAAGGGCGGGCAAGUCAUCACUGCUGCACGA
Get precursor sequence
Structure
        10            20        30        40        50        
AAAGAGAAAGAUUUGAG----|  AAUAA     C          UGC       UGUUGA 
                     CUC     CUUUA UAAGUACUGG   CGCGGGA      \
                     GGG     GAAGU AUUCAUGGCC   GCGUCCU      U
AGCACGUCGUCACUACUGAAC^  CGG--     C          UUU       CGAGUA 
     110       100          90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Pve-Mir-252-P2_5p
mirBase accessionNone
Sequence 
0- CUAAGUACUGGUGCCGCGGGA -21
Get sequence
Star sequence

Pve-Mir-252-P2_3p*
mirBase accessionNone
Sequence 
36- CUGCGUUUCCGGUACUUACUG -57
Get sequence