MirGeneDB 3.0
MirGeneDB ID

Hru-Mir-252-P2

Family name MIR-252 (all species)
Seed UAAGUAC
Species Red Abalone (Haliotis rufescens)
MiRBase ID
Paralogues Hru-Mir-252-P1 
Orthologues Aae-Mir-252-P2  Aga-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Csc-Mir-252-P2k  Csc-Mir-252-P2l-v1  Csc-Mir-252-P2l-v2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dlo-Mir-252-P2  Dma-Mir-252-P2-v1  Dma-Mir-252-P2-v2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Llo-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pau-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Pve-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Tur-Mir-252-P2-v1  Tur-Mir-252-P2-v2  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_023055435.1_xgHalRufe1.0.p_genomic_plus_traces)		 JALGQA010000012.1: 1902167-1902227 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGCAGCACCGAGUCUCUUCUGUCCGUUACUAAGUACUGGUGCCGCAGGAGUCUGUGUUCGCUACACUCCCGCGACUCUGGUGCUUACUAUUGGUACAGGUUUUACGUCAUACGUCAUCA
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Structure
        10         20         30        40        50          
CCAGCAGCACCGAGUCUCU-     -|  U  C       UG UGC   A    UCUGUGU 
                    UCUGU CCG UA UAAGUAC  G   CGC GGAG       \
                    GGACA GGU AU AUUCGUG  C   GCG CCUC       U
ACUACUGCAUACUGCAUUUU     U^  U  C       GU UCA   C    ACAUCGC 
 .       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ha Ha
Mature sequence

Hru-Mir-252-P2_5p
mirBase accessionNone
Sequence 
0- CUAAGUACUGGUGCCGCAGGAG -22
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Star sequence

Hru-Mir-252-P2_3p* (predicted)
mirBase accessionNone
Sequence 
39- CCCGCGACUCUGGUGCUUACUA -61
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