MirGeneDB 2.1

MirGeneDB ID

Lan-Mir-252-P2

Family name MIR-252 (all species)
Seed UAAGUAC
Species Lingula (Lingula anatina)
MiRBase ID
Paralogues Lan-Mir-252-P1 
Orthologues Aae-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Cgi-Mir-252-P2  Csc-Mir-252-P2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dma-Mir-252-P2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Hme-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lgi-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Npo-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Sko-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Xbo-Mir-252-P2g  Xbo-Mir-252-P2h 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(LinAna_1.0)
LFEI01000174: 379390-379447 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUUUAUAUCCCCCACCACCAGGGCUCAACACUAAGUACUAGUGCCGCAGGAGUAAAUGCGAGGCCUCCUGUUGUUCUGGUACUUACUAUAGGGCCCGACAUAUACGAGGGGGUGGAUG
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Structure
        10        20          30        40        50        
GUUUAUAUCCCCCACCACCA--|     AACAC          U  C       UAAAU 
                      GGGCUC     UAAGUACUAG GC GCAGGAG     G
                      CCCGGG     AUUCAUGGUC UG UGUCCUC     C
GUAGGUGGGGGAGCAUAUACAG^     AUAUC          U  U       CGGAG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
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Mature sequence

Lan-Mir-252-P2_5p

mirBase accessionNone
Sequence
0- CUAAGUACUAGUGCCGCAGGAGU -23
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Star sequence

Lan-Mir-252-P2_3p* (predicted)

mirBase accessionNone
Sequence
35- UCCUGUUGUUCUGGUACUUACUA -58
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