MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-252-P2

Family name MIR-252 (all species)
Seed UAAGUAC
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-252a
Paralogues Tca-Mir-252-P1 
Orthologues Aae-Mir-252-P2  Aga-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Csc-Mir-252-P2k  Csc-Mir-252-P2l-v1  Csc-Mir-252-P2l-v2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dlo-Mir-252-P2  Dma-Mir-252-P2-v1  Dma-Mir-252-P2-v2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Hru-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Llo-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pau-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Pve-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tur-Mir-252-P2-v1  Tur-Mir-252-P2-v2  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Tcas5.2)		 LG9: 7058373-7058428 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-252-P2)		 Mir-252-P1 LG9: 7050461-7050518 [+] Ensembl
Mir-252-P2 LG9: 7058373-7058428 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUUUCAAGGGAAAAAGACUGUCCUGUUACUAAGUACUAGUGCCGCAGGAGUACAUUCGACCUCCUGCUGCUCAAGUGCUUAUCAAUGGGCACAGAAUGAUUUCAUCAACCGGCG
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Structure
        10         20         30        40        50       
CUCUUUCAAGGGAAAAAGA-    -|     AC        AGU  C       UACA 
                    CUGU CCUGUU  UAAGUACU   GC GCAGGAG    U
                    GACA GGGUAA  AUUCGUGA   CG CGUCCUC    U
GCGGCCAACUACUUUAGUAA    C^     CU        ACU  U       CAGC 
    110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-252-P2_5p
mirBase accessionMIMAT0018804
Sequence 
0- CUAAGUACUAGUGCCGCAGGAG -22
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Star sequence

Tca-Mir-252-P2_3p*
mirBase accessionMIMAT0018805
Sequence 
34- CCUGCUGCUCAAGUGCUUAUCA -56
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