MirGeneDB 3.0
MirGeneDB ID

Pmi-Mir-252-P2

Family name MIR-252 (all species)
Seed UAAGUAC
Species Bat starfish (Patiria miniata)
MiRBase ID pmi-mir-252a
Paralogues Pmi-Mir-252-P1 
Orthologues Aae-Mir-252-P2  Aga-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Csc-Mir-252-P2k  Csc-Mir-252-P2l-v1  Csc-Mir-252-P2l-v2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dlo-Mir-252-P2  Dma-Mir-252-P2-v1  Dma-Mir-252-P2-v2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Hru-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Llo-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pau-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pve-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Tur-Mir-252-P2-v1  Tur-Mir-252-P2-v2  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Pmin1)		 JH773771.1: 7688-7753 [+]
Clustered miRNAs
(< 50kb from Mir-252-P2)		 Mir-252-P1 JH773771.1: 6932-6991 [+]
Mir-252-P2 JH773771.1: 7688-7753 [+]
Precursor
(pre-Mir +30nt flank)
GACAUCGACGGUGUUUUUGCUUGCUCUGUUCUAAGUACUAGUGCCGCAGUUGUUCCAUUGAUUUCAAGACAUCAACUGCUACUCUGGUGCUUAACACGGGGUCUGGCUAAUAAUCACACGCUGUCA
Get precursor sequence
Structure
        10         20         30        40        50        60  
GACAUCGACGGUGUUUUU-   U-|      UC          UGCC       UUCCAUUGA 
                   GCU  GCUCUGU  UAAGUACUAG    GCAGUUG         U
                   CGG  UGGGGCA  AUUCGUGGUC    CGUCAAC         U
ACUGUCGCACACUAAUAAU   UC^      CA          UCAU       UACAGAACU 
    120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Em To
Mature sequence

Pmi-Mir-252-P2_5p
mirBase accessionMIMAT0032170
Sequence 
0- CUAAGUACUAGUGCCGCAGUUG -22
Get sequence
Star sequence

Pmi-Mir-252-P2_3p*
mirBase accessionNone
Sequence 
44- ACUGCUACUCUGGUGCUUAACA -66
Get sequence