MirGeneDB 3.0
MirGeneDB ID

Tur-Mir-252-P2-v1

Family name MIR-252 (all species)
Seed UAAGUAC
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID tur-mir-252
Paralogues Tur-Mir-252-P1  Tur-Mir-252-P2-v2 
Orthologues Aae-Mir-252-P2  Aga-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Csc-Mir-252-P2k  Csc-Mir-252-P2l-v1  Csc-Mir-252-P2l-v2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dlo-Mir-252-P2  Dma-Mir-252-P2-v1  Dma-Mir-252-P2-v2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Hru-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Llo-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pau-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Pve-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)		 HE587307.1: 717896-717972 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-252-P2-v1)		 Mir-252-P2-v1 HE587307.1: 717896-717972 [-] Ensembl
Mir-252-P2-v2 HE587307.1: 717897-717971 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUCGACUGAAUGACCACCACCUUCCUGUUCUAAGUACUAGCGCCGCAGGAGUGUUUACAUCUCUUUUGGUAUAUUAAAUUCACUCCUGCAGCCUUGGUGCUUACUAUGGGACGGUGCAGGGUAAAUUAGUAAAUUA
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Structure
        10          20        30        40        50        60        
AAUCGACUGAAUGACCAC--|   U      UC          C  C       UGUUUACAUCUCUUU 
                    CACC UCCUGU  UAAGUACUAG GC GCAGGAG               \
                    GUGG AGGGUA  AUUCGUGGUU CG CGUCCUC               U
AUUAAAUGAUUAAAUGGGAC^   C      UC          C  A       ACUUAAAUUAUAUGG 
     130       120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
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Mature sequence

Tur-Mir-252-P2-v1_5p
mirBase accessionMIMAT0023076
Sequence 
0- CUAAGUACUAGCGCCGCAGGAG -22
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Star sequence

Tur-Mir-252-P2-v1_3p*
mirBase accessionMIMAT0023077
Sequence 
55- CCUGCAGCCUUGGUGCUUACUA -77
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