MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-252-P2

Family name MIR-252 (all species)
Seed UAAGUAC
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-252-P1 
Orthologues Aae-Mir-252-P2  Aga-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Csc-Mir-252-P2k  Csc-Mir-252-P2l-v1  Csc-Mir-252-P2l-v2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dma-Mir-252-P2-v1  Dma-Mir-252-P2-v2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Hru-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Llo-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pau-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Pve-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Tur-Mir-252-P2-v1  Tur-Mir-252-P2-v2  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087225.1: 57855-57929 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUCGCGGAGUGACUGAUCCUGCCCUGUUCCUAAGUACUAGUGCCGCAGGAGUGACUAGACUGGGCUAGAAAUUACCAUGUCUCCUGCUGCUCAAGUGCUUAUCAAUGGGUCGGGACGUGCAUCUGUAAACAAGU
Get precursor sequence
Structure
        10          20        30        40        50        60       
AUUCGCGGAGUGACUGA--|    C      CC        AGU  C       UGACUAGACUGGGC 
                   UCCUG CCUGUU  UAAGUACU   GC GCAGGAG              \
                   AGGGC GGGUAA  AUUCGUGA   CG CGUCCUC              U
UGAACAAAUGUCUACGUGC^    U      CU        ACU  U       UGUACCAUUAAAGA 
   130       120       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Sr Sr
Mature sequence

Dlo-Mir-252-P2_5p

mirBase accessionNone
Sequence
0- CUAAGUACUAGUGCCGCAGGAG -22
Get sequence
Star sequence

Dlo-Mir-252-P2_3p*

mirBase accessionNone
Sequence
53- CCUGCUGCUCAAGUGCUUAUCA -75
Get sequence