MirGeneDB 3.0
MirGeneDB ID

Pau-Mir-252-P2

Family name MIR-252 (all species)
Seed UAAGUAC
Species Horseshoe worm (Phoronis australis)
MiRBase ID
Paralogues Pau-Mir-252-P1 
Orthologues Aae-Mir-252-P2  Aga-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Csc-Mir-252-P2k  Csc-Mir-252-P2l-v1  Csc-Mir-252-P2l-v2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dlo-Mir-252-P2  Dma-Mir-252-P2-v1  Dma-Mir-252-P2-v2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Hru-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Llo-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Pve-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Tur-Mir-252-P2-v1  Tur-Mir-252-P2-v2  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Phoronis_australis_GCA_002633005)		 NMRA01000092.1: 878243-878300 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUCGUUCACCAACUCGAGCCAGUUCGCAUCUAAGUACUAGUGCCGCAGGAGCUAUAUUCGCGCCUCCUGUUGUUCUGGUACUUAAACUAGAGCUUGGAUGAUAAUCUUCCCUUCAGC
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Structure
        10         20         30        40        50        
GGUCGUUCACCAACUCGAG-  -|    GCAUC          U  C       CUAUA 
                    CC AGUUC     UAAGUACUAG GC GCAGGAG     U
                    GG UCGAG     AUUCAUGGUC UG UGUCCUC     U
CGACUUCCCUUCUAAUAGUA  U^    AUCAA          U  U       CGCGC 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Ph
Mature sequence

Pau-Mir-252-P2_5p
mirBase accessionNone
Sequence 
0- CUAAGUACUAGUGCCGCAGGAG -22
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Star sequence

Pau-Mir-252-P2_3p* (predicted)
mirBase accessionNone
Sequence 
36- CCUGUUGUUCUGGUACUUAAAC -58
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