MirGeneDB 3.0
MirGeneDB ID

Llo-Mir-252-P2

Family name MIR-252 (all species)
Seed UAAGUAC
Species Bootlace worm (Lineus longissimus)
MiRBase ID
Paralogues Llo-Mir-252-P1 
Orthologues Aae-Mir-252-P2  Aga-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Csc-Mir-252-P2k  Csc-Mir-252-P2l-v1  Csc-Mir-252-P2l-v2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dlo-Mir-252-P2  Dma-Mir-252-P2-v1  Dma-Mir-252-P2-v2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Hru-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pau-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Pve-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Tur-Mir-252-P2-v1  Tur-Mir-252-P2-v2  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_910592395.2_tnLinLong1)		 OU342997.1: 3159384-3159443 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CCACCUUCUAAAGAGCGCCAUUGCCAGACACUAAGUACUAGUGCCGCAGGAGUACCUUUAACAACUCUCCUGUCGUCCUGGUACUUAAUUUAGGGCAUGGCAAAAUCAUCAUUCAAUUAC
Get precursor sequence
Structure
        10           20        30        40        50         
CCACCUUCUAAAGAGCG---|   U   AGACAC          UG C       UACCUU 
                    CCAU GCC      UAAGUACUAG  C GCAGGAG      U
                    GGUA CGG      AUUCAUGGUC  G UGUCCUC      A
CAUUAACUUACUACUAAAAC^   -   GAUUUA          CU C       UCAACA 
.       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
No No No No No No
Mature sequence

Llo-Mir-252-P2_5p
mirBase accessionNone
Sequence 
0- CUAAGUACUAGUGCCGCAGGAGU -23
Get sequence
Star sequence

Llo-Mir-252-P2_3p* (predicted)
mirBase accessionNone
Sequence 
37- UCCUGUCGUCCUGGUACUUAAUU -60
Get sequence