MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-252-P2d

Family name MIR-252 (all species)
Seed UAAGUAC
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-252-P1c  Lpo-Mir-252-P1e  Lpo-Mir-252-P1f  Lpo-Mir-252-P2c 
Orthologues Aae-Mir-252-P2  Aga-Mir-252-P2  Agr-Mir-252-P2  Bfl-Mir-252-P2  Bge-Mir-252-P2-v1  Bge-Mir-252-P2-v2  Bla-Mir-252-P2  Cbr-Mir-252-P2  Cel-Mir-252-P2  Cte-Mir-252-P2  Dan-Mir-252-P2-v1  Dan-Mir-252-P2-v2  Dlo-Mir-252-P2  Dma-Mir-252-P2-v1  Dma-Mir-252-P2-v2  Dme-Mir-252-P2-v1  Dme-Mir-252-P2-v2  Dmo-Mir-252-P2-v1  Dmo-Mir-252-P2-v2  Dpu-Mir-252-P2-v1  Dpu-Mir-252-P2-v2  Dsi-Mir-252-P2-v1  Dsi-Mir-252-P2-v2  Dya-Mir-252-P2-v1  Dya-Mir-252-P2-v2  Eba-Mir-252-P2  Gpa-Mir-252-P2  Hme-Mir-252-P2  Hru-Mir-252-P2  Isc-Mir-252-P2-v1  Isc-Mir-252-P2-v2  Lan-Mir-252-P2  Lgi-Mir-252-P2  Llo-Mir-252-P2  Mgi-Mir-252-P2  Mom-Mir-252-P2  Npo-Mir-252-P2  Ofu-Mir-252-P2  Pau-Mir-252-P2  Pcr-Mir-252-P2  Pdu-Mir-252-P2  Pfl-Mir-252-P2  Pmi-Mir-252-P2  Pve-Mir-252-P2  Sko-Mir-252-P2  Snu-Mir-252-P2  Spu-Mir-252-P2  Tca-Mir-252-P2  Tur-Mir-252-P2-v1  Tur-Mir-252-P2-v2  War-Mir-252-P2  Xbo-Mir-252-P2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013668086.1: 171546-171604 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUAUUAACUGAAGCAAGUGAGACCCAAUUCUAAGUACUAGCGCCGCAGGAGUGUUAAUUCACAACUCCUGCAGCCUUGGUGCUUACUGUGGGGUAGUCACGUUACUCCUUUGUUCAGU
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Structure
        10         20         30        40        50         
UUUAUUAACUGAAGCAA-    G-|   A  UC          C  C       UGUUAA 
                  GUGA  ACCC AU  UAAGUACUAG GC GCAGGAG      \
                  CACU  UGGG UG  AUUCGUGGUU CG CGUCCUC      U
UGACUUGUUUCCUCAUUG    GA^   G  UC          C  A       AACACU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ge Ge So So So To
Mature sequence

Lpo-Mir-252-P2d_5p
mirBase accessionNone
Sequence 
0- CUAAGUACUAGCGCCGCAGGAG -22
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Star sequence

Lpo-Mir-252-P2d_3p* (predicted)
mirBase accessionNone
Sequence 
37- CCUGCAGCCUUGGUGCUUACUG -59
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