MirGeneDB 3.0
27 microRNA genes with node of origin Daphnia
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Dma-Mir-2-o2 None MIR-2 GAUAAUU None None NC_046178.1 1060033 1060091 - Daphnia Protostomia No 1
Dpu-Mir-2-o2 None MIR-2 AUCACAG None None DAPPUscaffold_77 78818 78876 - Daphnia Protostomia No 1
Dma-Mir-87-o5a None MIR-87 UGAGCAA None None NC_046176.1 6157349 6157434 - Daphnia Protostomia No 1
Dpu-Mir-87-o5a None MIR-87 UGAGCAA None None DAPPUscaffold_1 2190896 2190980 + Daphnia Protostomia No 1
Dma-Mir-87-o5b None MIR-87 UGAGCAA None None NC_046176.1 6157168 6157231 - Daphnia Protostomia No 1
Dpu-Mir-87-o5b None MIR-87 UGAGCAA None None DAPPUscaffold_1 2191079 2191142 + Daphnia Protostomia No 1
Dma-Mir-279-o8 None MIR-279 GUGAGCG None None NC_046179.1 204663 204723 - Daphnia Protostomia No 1 1
Dpu-Mir-279-o8 None MIR-279 GACUAGA None None DAPPUscaffold_62 283702 283760 - Daphnia Protostomia No 1 1 1
Dma-Mir-279-o9 None MIR-279 GACUAGA None None NC_046182.1 2914774 2914845 + Daphnia Protostomia No
Dpu-Mir-279-o9 None MIR-279 GACUAGA None None DAPPUscaffold_63 523653 523745 - Daphnia Protostomia No
Dma-Mir-279-P1c None MIR-279 GACUAGA None None NC_046175.1 6287015 6287090 - Daphnia Protostomia No 1 1
Dpu-Mir-279-P1c None MIR-279 GACUAGA None None DAPPUscaffold_32 69703 69769 - Daphnia Protostomia No 1
Dma-Mir-279-P1d None MIR-279 GACUAGA None None NC_046175.1 6285937 6286000 - Daphnia Protostomia No 1
Dpu-Mir-279-P1d dpu-mir-279b MIR-279 GACUAGA None MIMAT0018923 DAPPUscaffold_32 68663 68726 - Daphnia Protostomia No 1
Dma-Mir-12603 None MIR-12603 GUGAUGU None None NC_046182.1 5639526 5639593 - Daphnia Daphnia No 1 1
Dpu-Mir-12603 None MIR-12603 GUGAUGU None None DAPPUscaffold_58 365534 365601 - Daphnia Daphnia No 1 1
Dma-Mir-12604 None MIR-12604 CUGGGUU None None NC_046174.1 2509619 2509677 + Daphnia Daphnia No 1
Dpu-Mir-12604 None MIR-12604 CUGGGUU None None DAPPUscaffold_24 361300 361359 - Daphnia Daphnia No 1
Dma-Mir-12605 None MIR-12605 UGCACUG None None NC_046183.1 5280622 5280684 + Daphnia Daphnia No
Dpu-Mir-12605 None MIR-12605 UGCACUG None None DAPPUscaffold_13 1740035 1740097 + Daphnia Daphnia No 1
Dma-Mir-12606 None MIR-12606 CUUGGUU None None NC_046174.1 2509231 2509290 + Daphnia Daphnia No 1 1
Dpu-Mir-12606 None MIR-12606 CUUGGUU None None DAPPUscaffold_24 361694 361754 - Daphnia Daphnia No 1 1
Dpu-Mir-12607 None MIR-12607 ACUGGGU None None DAPPUscaffold_24 361858 361920 - Daphnia Daphnia Unknown 1
Dma-Mir-12607-v1 None MIR-12607 ACUGGGU None None NC_046174.1 2509081 2509143 + Daphnia Daphnia No
Dma-Mir-12607-v2 None MIR-12607 CUGGGUA None None NC_046174.1 2509081 2509143 + Daphnia Daphnia No
Dma-Mir-12608 None MIR-12608 GGGGGAA None None NC_046175.1 6286446 6286507 - Daphnia Daphnia No
Dpu-Mir-12608 None MIR-12608 CACUGGG None None CAJVNM010000013.1:1301350-1301500 54 115 + Daphnia Daphnia No 1

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