| MirGeneDB ID | Lpo-Mir-3931-P3 |
|---|
| Family name |
MIR-3931 (all species) |
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| Seed |
ACUUUGA |
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| Species |
Atlantic horseshoe crab (Limulus polyphemus) |
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| MiRBase ID |
|
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| Paralogues |
Lpo-Mir-3931-P1
Lpo-Mir-3931-P2
Lpo-Mir-3931-P4
Lpo-Mir-3931-P5
Lpo-Mir-3931-P6
Lpo-Mir-3931-P7
|
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| Orthologues |
Isc-Mir-3931
Tur-Mir-3931
|
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| Node of Origin (locus) |
L. polyphemus
|
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| Node of Origin (family) |
Chelicerata
|
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Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic) |
NW_013670147.1: 20010-20071 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGGGCGGCUGACACUGCGUGGUUUAGGGGCGGUUUGUACCGAUUCAGGGCAAGGUUAGUGAUCGUUAACUACUUUGAGUCGGUACGAAUCACUUCAACCAUGUCCUCUCAUCGAGAAGACAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGGGCGGCUGACACUGC----| UA C CA GUUAGUG
GUGGUU GGGG GGUUUGUACCGAUUCAGGG AG \
UACCAA CUUC CUAAGCAUGGCUGAGUUUC UC A
AACAGAAGAGCUACUCUCCUG^ -- A A- AAUUGCU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Star sequence |
Lpo-Mir-3931-P3_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- GGUUUGUACCGAUUCAGGGCAAGGU -25
Get sequence
|
|---|
| Mature sequence |
Lpo-Mir-3931-P3_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UACUUUGAGUCGGUACGAAUCAC -62
Get sequence
|
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