MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-3931-P2

Family name MIR-3931 (all species)
Seed ACUUUGA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-3931-P1  Lpo-Mir-3931-P3  Lpo-Mir-3931-P4  Lpo-Mir-3931-P5  Lpo-Mir-3931-P6  Lpo-Mir-3931-P7 
Orthologues Isc-Mir-3931  Tur-Mir-3931 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Chelicerata
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665640.1: 1334175-1334236 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUCAACAUAACCUAACGUGGUUUAGGGGCGGUUUGUACCGAUUCAGGGCAAGGUUCGUUAAUGAGAACUACUUUGAGUCGGUACGAAUCACCUCAGCCAUGAUUCAUCAUCUAGAAGACUA
Get precursor sequence
Structure
        10            20        30        40        50        60 
GAUCAACAUAACCUAAC----|     UA    C                   CA  GUUCGUU 
                     GUGGUU  GGGG GGUUUGUACCGAUUCAGGG  AG       \
                     UACCGA  CUCC CUAAGCAUGGCUGAGUUUC  UC       A
AUCAGAAGAUCUACUACUUAG^     --    A                   A-  AAGAGUA 
120       110       100          90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-3931-P2_5p*
mirBase accessionNone
Sequence 
0- GGUUUGUACCGAUUCAGGGCAAGGU -25
Get sequence
Mature sequence

Lpo-Mir-3931-P2_3p
mirBase accessionNone
Sequence 
39- UACUUUGAGUCGGUACGAAUCAC -62
Get sequence