MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-3931-P4

Family name MIR-3931 (all species)
Seed ACUUUGA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-3931-P1  Lpo-Mir-3931-P2  Lpo-Mir-3931-P3  Lpo-Mir-3931-P5  Lpo-Mir-3931-P6  Lpo-Mir-3931-P7 
Orthologues Isc-Mir-3931  Tur-Mir-3931 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Chelicerata
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013674342.1: 28045-28106 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AGUGAAGAGCGUCCAGCGUGGUUUAGGGGCGGUUUGUACCGAUUCAGGGCAAAGUUCGUUAAAGGUAACUACUUUGAGUCGGUACGAAUCACUUCAGCCGCGACUUUUCGUCGAGAUGAAAA
Get precursor sequence
Structure
        10            20        30        40        50        60 
AGUGAAGAGCGUCCAGC----|     UA    C                   CAA   UCGUU 
                     GUGGUU  GGGG GGUUUGUACCGAUUCAGGG   AGU     A
                     CGCCGA  CUUC CUAAGCAUGGCUGAGUUUC   UCA     A
AAAAGUAGAGCUGCUUUUCAG^     --    A                   A--   AUGGA 
120       110       100          90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-3931-P4_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGUUUGUACCGAUUCAGGGCAAAGU -25
Get sequence
Mature sequence

Lpo-Mir-3931-P4_3p
mirBase accessionNone
Sequence 
39- UACUUUGAGUCGGUACGAAUCAC -62
Get sequence