MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-8-P8

Family name MIR-8 (all species)
Seed AAUACUG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-8-P7  Lpo-Mir-8-P9  Lpo-Mir-8-P10  Lpo-Mir-8-P11  Lpo-Mir-8-P12  Lpo-Mir-8-P13 
Orthologues Aae-Mir-8  Aga-Mir-8  Agr-Mir-8  Asu-Mir-8  Bge-Mir-8  Bko-Mir-8  Bpl-Mir-8  Cbr-Mir-8  Cel-Mir-8  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dgr-Mir-8  Dlo-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dpu-Mir-8  Dsi-Mir-8  Dya-Mir-8  Eba-Mir-8  Egr-Mir-8  Esc-Mir-8  Gpa-Mir-8  Gsa-Mir-8  Hme-Mir-8  Hru-Mir-8  Isc-Mir-8  Lan-Mir-8  Lgi-Mir-8  Lhy-Mir-8  Llo-Mir-8  Mgi-Mir-8  Mom-Mir-8  Npo-Mir-8  Obi-Mir-8  Ofu-Mir-8  Ovu-Mir-8  Pau-Mir-8  Pca-Mir-8  Pdu-Mir-8  Pfl-Mir-8  Pmi-Mir-8  Pve-Mir-8  Rph-Mir-8  Sko-Mir-8  Sma-Mir-8  Snu-Mir-8  Spu-Mir-8  Tca-Mir-8  Tur-Mir-8  War-Mir-8 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Nephrozoa
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013668908.1: 72411-72470 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUGAGCGCUCAGUGACAGAUCUUCGGAAGCAUCUUACCAGGCAGCAUUAGACUGACAAAUAACUUCUAAUACUGUCAGGUAAAGAUGUCUACGGGGUCUGUGAAUGCAACAAUAUCUGG
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Structure
        10           20        30         40        50         
UUUGAGCGCUCAGUGAC---|     U  GAA       -   A     C      CUGACA 
                    AGAUCU CG   GCAUCUU ACC GGCAG AUUAGA      \
                    UCUGGG GC   UGUAGAA UGG CUGUC UAAUCU      A
GGUCUAUAACAACGUAAGUG^     -  AUC       A   A     A      UCAAUA 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-8-P8_5p*
mirBase accessionNone
Sequence 
0- CAUCUUACCAGGCAGCAUUAGA -22
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Mature sequence

Lpo-Mir-8-P8_3p
mirBase accessionNone
Sequence 
37- UAAUACUGUCAGGUAAAGAUGUC -60
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