MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-8-P9

Family name MIR-8 (all species)
Seed AAUACUG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-8-P7  Lpo-Mir-8-P8  Lpo-Mir-8-P10  Lpo-Mir-8-P11  Lpo-Mir-8-P12  Lpo-Mir-8-P13 
Orthologues Aae-Mir-8  Aga-Mir-8  Agr-Mir-8  Asu-Mir-8  Bge-Mir-8  Bko-Mir-8  Bpl-Mir-8  Cbr-Mir-8  Cel-Mir-8  Csc-Mir-8  Cte-Mir-8  Dan-Mir-8  Dgr-Mir-8  Dlo-Mir-8  Dma-Mir-8  Dme-Mir-8  Dmo-Mir-8  Dpu-Mir-8  Dsi-Mir-8  Dya-Mir-8  Eba-Mir-8  Egr-Mir-8  Esc-Mir-8  Gpa-Mir-8  Gsa-Mir-8  Hme-Mir-8  Hru-Mir-8  Isc-Mir-8  Lan-Mir-8  Lgi-Mir-8  Lhy-Mir-8  Llo-Mir-8  Mgi-Mir-8  Mom-Mir-8  Npo-Mir-8  Obi-Mir-8  Ofu-Mir-8  Ovu-Mir-8  Pau-Mir-8  Pca-Mir-8  Pdu-Mir-8  Pfl-Mir-8  Pmi-Mir-8  Pve-Mir-8  Rph-Mir-8  Sko-Mir-8  Sma-Mir-8  Snu-Mir-8  Spu-Mir-8  Tca-Mir-8  Tur-Mir-8  War-Mir-8 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Nephrozoa
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665909.1: 72747-72809 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
ACGGAUUUUCAAGUAACAGAUUCUCGGGAACAUCUUACCAGGCAGAUAUAGAGUGAAAUAUUCAAACAUCUAAUACUGUCAGGUAAAGAUGUCCACGAGAUAUGCUUAUGCAACGUUACCAGA
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Structure
        10        20           30         40        50        60
ACGGAUUUUCAAGUAACAGAU--     -|  A      -   A     AUA    GUGAAAU 
                       UCUCG GGA CAUCUU ACC GGCAG   UAGA       A
                       AGAGC CCU GUAGAA UGG CUGUC   AUCU       U
AGACCAUUGCAACGUAUUCGUAU     A^  -      A   A     AUA    ACAAACU 
 120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-8-P9_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAUCUUACCAGGCAGAUAUAGA -22
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Mature sequence

Lpo-Mir-8-P9_3p
mirBase accessionNone
Sequence 
40- UAAUACUGUCAGGUAAAGAUGUC -63
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