MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-279-P8

Family name MIR-279 (all species)
Seed GACUAGA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-279-P4  Lpo-Mir-279-P5  Lpo-Mir-279-P6  Lpo-Mir-279-P7 
Orthologues Agr-Mir-279  Bpl-Mir-279  Dma-Mir-279-o8  Dpu-Mir-279-o8  Eba-Mir-279  Egr-Mir-279  Esc-Mir-279  Gsa-Mir-279  Gsp-Mir-279  Hru-Mir-279  Isc-Mir-279  Lgi-Mir-279  Lhy-Mir-279  Llo-Mir-279  Mgi-Mir-279  Mom-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279  Pau-Mir-279  Pcr-Mir-279  Pve-Mir-279  Rph-Mir-279  Sma-Mir-279  Sne-Mir-279 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013670263.1: 51426-51484 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GACUACCUGUUAUAUUUUCUACUGUGGAUGGAUGACUGUGCGUCUGGUGCAUGUCACUCUGAUAGCAUGACUAGAUCCACACUCAUCCAUUCCUGUGGAUUUUGGCAUCGACCCACCUU
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Structure
        10           20        30        40        50         
GACUACCUGUUAUAUUU---|    UGU          C    C       G    UCACU 
                    UCUAC   GGAUGGAUGA UGUG GUCUGGU CAUG     C
                    AGGUG   CUUACCUACU ACAC UAGAUCA GUAC     U
UUCCACCCAGCUACGGUUUU^    UC-          C    C       -    GAUAG 
       110       100         90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-279-P8_5p*
mirBase accessionNone
Sequence 
0- GAUGACUGUGCGUCUGGUGCAUG -23
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Mature sequence

Lpo-Mir-279-P8_3p
mirBase accessionNone
Sequence 
37- UGACUAGAUCCACACUCAUCCA -59
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