MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-124-P21

Family name MIR-124 (all species)
Seed AAGGCAC
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-124-P19  Lpo-Mir-124-P20  Lpo-Mir-124-P22  Lpo-Mir-124-P23  Lpo-Mir-124-P24 
Orthologues Aae-Mir-124  Aga-Mir-124  Agr-Mir-124  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bko-Mir-124  Bla-Mir-124  Bpl-Mir-124  Cel-Mir-124  Cte-Mir-124  Dan-Mir-124  Dlo-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dpu-Mir-124  Dsi-Mir-124  Dya-Mir-124  Eba-Mir-124  Esc-Mir-124  Gpa-Mir-124  Gsp-Mir-124  Hme-Mir-124  Hru-Mir-124  Isc-Mir-124  Lan-Mir-124  Lhy-Mir-124  Llo-Mir-124  Mgi-Mir-124  Mom-Mir-124  Npo-Mir-124  Obi-Mir-124  Ofu-Mir-124  Ovu-Mir-124  Pau-Mir-124  Pdu-Mir-124  Pfl-Mir-124  Pmi-Mir-124  Pve-Mir-124  Sko-Mir-124  Sma-Mir-124  Sne-Mir-124  Snu-Mir-124  Spu-Mir-124  Sro-Mir-124  Tca-Mir-124  War-Mir-124  Xbo-Mir-124 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013672689.1: 33081-33140 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAGAAAGAAAAAAAUUACUGUCUGACUCUCAGUGUUCAUCACUGGCCUCGAUGUGUUUGUUGAAACCAUAAGGCACGCGGUGAAUGCCAAGAAUGAGACUGGAAGACAACAAUGAAGCAC
Get precursor sequence
Structure
        10          20        30        40        50          
AAGAAAGAAAAAAAUUA-  -|   GAC   CA         ACUG    CG   UGUUUG 
                  CU GUCU   UCU  GUGUUCAUC    GCCU  AUG      \
                  GG CAGA   AGA  CGUAAGUGG    CGGA  UAC      U
CACGAAGUAACAACAGAA  U^   GUA   AC         CGCA    A-   CAAAGU 
.       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-124-P21_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUGUUCAUCACUGGCCUCGAUG -23
Get sequence
Mature sequence

Lpo-Mir-124-P21_3p
mirBase accessionNone
Sequence 
38- UAAGGCACGCGGUGAAUGCCAA -60
Get sequence