MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-2-P2h

Family name MIR-2 (all species)
Seed AUCACAG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Lpo-Mir-2-P2g  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Lpo-Mir-2-P3g  Lpo-Mir-2-P3h  Lpo-Mir-2-P3i  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Lpo-Mir-2-P4h  Lpo-Mir-2-P4i  Lpo-Mir-2-P4j  Lpo-Mir-2-P4k  Lpo-Mir-2-P4l 
Orthologues Dma-Mir-2-o2  Dma-Mir-2-P2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665701.1: 196891-196951 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGAAAGGGACAUAUAUCGAGUAUCUCCAGAUCGCCAAAAUUGCUGUGAUGUGUUAGUGAAUGAAAUCCAUAUCACAGCCGUAUUGACGAUUCAUGGGAUUACCAUCGGACUCCAUCUUCUA
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Structure
        10        20          30        40        50          
AGAAAGGGACAUAUAUCGA   UC    --|    C   A  U           UUAGUGA 
                   GUA  UCCA  GAUCG CAA AU GCUGUGAUGUG       \
                   CAU  GGGU  UUAGC GUU UG CGACACUAUAC       A
AUCUUCUACCUCAGGCUAC   UA    AC^    A   A  C           CUAAAGU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-2-P2h_5p*
mirBase accessionNone
Sequence 
0- UCGCCAAAAUUGCUGUGAUGUG -22
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Mature sequence

Lpo-Mir-2-P2h_3p
mirBase accessionNone
Sequence 
39- UAUCACAGCCGUAUUGACGAUU -61
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