MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-2-P4h

Family name MIR-2 (all species)
Seed AUCACAG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Lpo-Mir-2-P3g  Lpo-Mir-2-P3h  Lpo-Mir-2-P3i  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Lpo-Mir-2-P4i  Lpo-Mir-2-P4j  Lpo-Mir-2-P4k  Lpo-Mir-2-P4l 
Orthologues Aae-Mir-2-P4-v1  Aae-Mir-2-P4-v2  Aga-Mir-2-P4-v1  Aga-Mir-2-P4-v2  Bge-Mir-2-P4-v1  Bge-Mir-2-P4-v2  Cbr-Mir-2-o4  Cel-Mir-2-o4  Dma-Mir-2-P4  Dpu-Mir-2-P4  Gsp-Mir-2  Hme-Mir-2-P4  Isc-Mir-2-P4  Ple-Mir-2  Tca-Mir-2-P4-v1  Tca-Mir-2-P4-v2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665701.1: 190384-190443 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAAUUGUUUUAAUCUUUUCCAUGAUUCCACUCGUCAAAGAGGCUUUGAUUCGUUAAGUAACUUCGUAUCACAGCCAGUUUUGAUGAGUGGAACUGUGGGCUAACCUCUUACUAGACAUA
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Structure
        10          20        30        40         50         
AAAAUUGUUUUAAUCUUU--     GA               A-|   U    U  UUAAG 
                    UCCAU  UUCCACUCGUCAAAG  GGCU UGAU CG     \
                    GGGUG  AAGGUGAGUAGUUUU  CCGA ACUA GC     U
AUACAGAUCAUUCUCCAAUC     UC               GA^   C    U  UUCAA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-2-P4h_5p* (predicted)
mirBase accessionNone
Sequence 
0- CUCGUCAAAGAGGCUUUGAUUCG -23
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Mature sequence

Lpo-Mir-2-P4h_3p
mirBase accessionNone
Sequence 
36- UAUCACAGCCAGUUUUGAUGAGUG -60
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