MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-2-P4k

Family name MIR-2 (all species)
Seed AUCACAG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-2-P1g  Lpo-Mir-2-P1h  Lpo-Mir-2-P1i  Lpo-Mir-2-P1j  Lpo-Mir-2-P1k  Lpo-Mir-2-P1l  Lpo-Mir-2-P1m  Lpo-Mir-2-P2g  Lpo-Mir-2-P2h  Lpo-Mir-2-P2j  Lpo-Mir-2-P2l  Lpo-Mir-2-P2m  Lpo-Mir-2-P3g  Lpo-Mir-2-P3h  Lpo-Mir-2-P3i  Lpo-Mir-2-P3k  Lpo-Mir-2-P3l  Lpo-Mir-2-P3m  Lpo-Mir-2-P4h  Lpo-Mir-2-P4i  Lpo-Mir-2-P4j  Lpo-Mir-2-P4l 
Orthologues Aae-Mir-2-P4-v1  Aae-Mir-2-P4-v2  Cbr-Mir-2-o4  Cel-Mir-2-o4  Dma-Mir-2-P4  Dpu-Mir-2-P4  Hme-Mir-2-P4  Isc-Mir-2-P4  Tca-Mir-2-P4-v1  Tca-Mir-2-P4-v2 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013666817.1: 121381-121442 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUCGUAAUAUAUUAAUCCCAUGUCUUCGGUCGUCAGAGUGGUUGUGAUAUGUUAUCUUUUAAAUCAUAUCACAGCCAGCUUUGAUGAGCGGAGAUGCAGGUUUCAAGCACAUUUUAUUAA
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Structure
        10          20        30        40         50          
UCUUCGUAAUAUAUUAAU--  CA        G         -|            UUAUCU 
                    CC  UGUCUUCG UCGUCAGAG UGGUUGUGAUAUG      \
                    GG  GUAGAGGC AGUAGUUUC ACCGACACUAUAC      U
AAUUAUUUUACACGAACUUU  AC        G         G^            UAAAUU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Star sequence

Lpo-Mir-2-P4k_5p*
mirBase accessionNone
Sequence 
0- GUCGUCAGAGUGGUUGUGAUAUG -23
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Mature sequence

Lpo-Mir-2-P4k_3p
mirBase accessionNone
Sequence 
38- UAUCACAGCCAGCUUUGAUGAGCG -62
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