MirGeneDB 3.0
MirGeneDB ID

Aae-Mir-2-P4-v1

Family name MIR-2 (all species)
Seed AUCACAG
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-2b
Paralogues Aae-Mir-2-P1-v1  Aae-Mir-2-P1-v2  Aae-Mir-2-P2b  Aae-Mir-2-P3  Aae-Mir-2-P4-v2  Aae-Mir-2-P5a  Aae-Mir-2-P5b  Aae-Mir-2-P7  Aae-Mir-2-P8 
Orthologues Aga-Mir-2-P4-v1  Aga-Mir-2-P4-v2  Bge-Mir-2-P4-v1  Bge-Mir-2-P4-v2  Cbr-Mir-2-o4  Cel-Mir-2-o4  Csc-Mir-2-P4n  Csc-Mir-2-P4o  Dan-Mir-2-P4a-v1  Dan-Mir-2-P4a-v2  Dan-Mir-2-P4b-v1  Dan-Mir-2-P4b-v2  Dma-Mir-2-P4  Dme-Mir-2-P4a-v1  Dme-Mir-2-P4a-v2  Dme-Mir-2-P4b-v1  Dme-Mir-2-P4b-v2  Dmo-Mir-2-P4a-v1  Dmo-Mir-2-P4a-v2  Dmo-Mir-2-P4b-v1  Dmo-Mir-2-P4b-v2  Dpu-Mir-2-P4  Dsi-Mir-2-P4a-v1  Dsi-Mir-2-P4a-v2  Dsi-Mir-2-P4b-v1  Dsi-Mir-2-P4b-v2  Dya-Mir-2-P4a-v1  Dya-Mir-2-P4a-v2  Dya-Mir-2-P4b-v1  Dya-Mir-2-P4b-v2  Gpa-Mir-2-P4a-v1  Gpa-Mir-2-P4a-v2  Gpa-Mir-2-P4b-v1  Gpa-Mir-2-P4b-v2  Gsp-Mir-2  Hme-Mir-2-P4  Isc-Mir-2-P4  Lpo-Mir-2-P4h  Lpo-Mir-2-P4i  Lpo-Mir-2-P4j  Lpo-Mir-2-P4k  Lpo-Mir-2-P4l  Ple-Mir-2  Tca-Mir-2-P4-v1  Tca-Mir-2-P4-v2 
Node of Origin (locus) Arthropoda
Node of Origin (family) Protostomia
Genome context
(Aaeg_L3)		 supercont1.268: 887257-887317 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P4-v1)		 Mir-2-P4-v1 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P4-v2 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P3 supercont1.268: 888595-888663 [-] Ensembl
Mir-2-P2b supercont1.268: 888744-888807 [-] Ensembl
Mir-2-P1-v1 supercont1.268: 889091-889155 [-] Ensembl
Mir-2-P1-v2 supercont1.268: 889091-889155 [-] Ensembl
Mir-71 supercont1.268: 889383-889449 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CGAUGCUCGCCAUUAAAGGGCGUAUUCUAGACUCUCAAAGUGGCUGUGAAAUGGUUUUAUUUUGCUCAUAUCACAGCCAGCUUUGAUGAGCUGGACUGCGCACCACGUUCAACGAAGUGAU
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Structure
        10         20        30         40         50          
CGAUGCUCGCCAUUAAAGG-     U     A   -      -|        A   GUUUUA 
                    GCGUA UCUAG CUC UCAAAG UGGCUGUGA AUG      \
                    CGCGU AGGUC GAG AGUUUC ACCGACACU UAC      U
UAGUGAAGCAACUUGCACCA     C     -   U      G^        A   UCGUUU 
 .       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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Star sequence

Aae-Mir-2-P4-v1_5p*
mirBase accessionNone
Sequence 
0- ACUCUCAAAGUGGCUGUGAAAUG -23
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Mature sequence

Aae-Mir-2-P4-v1_3p
mirBase accessionMIMAT0014306
Sequence 
38- UAUCACAGCCAGCUUUGAUGAGC -61
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