MirGeneDB 3.0
MirGeneDB ID

Csc-Mir-2-P4n

Family name MIR-2 (all species)
Seed AUCACAG
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-2-P1n  Csc-Mir-2-P1o  Csc-Mir-2-P2n  Csc-Mir-2-P2o  Csc-Mir-2-P3n  Csc-Mir-2-P3o  Csc-Mir-2-P4o 
Orthologues Aae-Mir-2-P4-v1  Aae-Mir-2-P4-v2  Aga-Mir-2-P4-v1  Aga-Mir-2-P4-v2  Bge-Mir-2-P4-v1  Bge-Mir-2-P4-v2  Cbr-Mir-2-o4  Cel-Mir-2-o4  Dma-Mir-2-P4  Dpu-Mir-2-P4  Gsp-Mir-2  Hme-Mir-2-P4  Isc-Mir-2-P4  Ple-Mir-2  Tca-Mir-2-P4-v1  Tca-Mir-2-P4-v2 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)		 NW_019384303.1: 1025167-1025228 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AUACGCAAAUGUUUUUAACUCAUGUUUCUAGUCGUCAGAGUGGUUUUGAUAUGUAAAACUCCUCUCCAUAUCACAGCCAGCUUUGAUGAGUAGAACCAUGGGUAAUGUAGCUUCUGCCUUGA
Get precursor sequence
Structure
        10          20        30        40         50          
AUACGCAAAUGUUUUUA--       U     G         -|    U       UAAAAC 
                   ACUCAUG UUCUA UCGUCAGAG UGGUU UGAUAUG      \
                   UGGGUAC AAGAU AGUAGUUUC ACCGA ACUAUAC      U
AGUUCCGUCUUCGAUGUAA       C     G         G^    C       CUCUCC 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-2-P4n_5p*
mirBase accessionNone
Sequence 
0- GUCGUCAGAGUGGUUUUGAUAUG -23
Get sequence
Mature sequence

Csc-Mir-2-P4n_3p
mirBase accessionNone
Sequence 
38- UAUCACAGCCAGCUUUGAUGAGUA -62
Get sequence