MirGeneDB 3.0

MirGeneDB ID

Aae-Mir-2-P2b

Family name MIR-2 (all species)
Seed AUCACAG
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-13
Paralogues Aae-Mir-2-P1-v1  Aae-Mir-2-P1-v2  Aae-Mir-2-P3  Aae-Mir-2-P4-v1  Aae-Mir-2-P4-v2  Aae-Mir-2-P5a  Aae-Mir-2-P5b  Aae-Mir-2-P7  Aae-Mir-2-P8 
Orthologues Aga-Mir-2-P2b  Bge-Mir-2-P2b  Dan-Mir-2-P2b1  Dan-Mir-2-P2b2  Dlo-Mir-2-P2b  Dma-Mir-2-o2  Dma-Mir-2-P2  Dme-Mir-2-P2b1  Dme-Mir-2-P2b2  Dmo-Mir-2-P2b1  Dmo-Mir-2-P2b2  Dpu-Mir-2-o2  Dpu-Mir-2-P2  Dsi-Mir-2-P2b1  Dsi-Mir-2-P2b2  Dya-Mir-2-P2b1  Dya-Mir-2-P2b2  Gpa-Mir-2-P2b  Gsp-Mir-2  Hme-Mir-2-P2b  Ple-Mir-2  Tca-Mir-2-P2b 
Node of Origin (locus) Neoptera
Node of Origin (family) Protostomia
Genome context
(Aaeg_L3)
supercont1.268: 888744-888807 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P2b)
Mir-2-P4-v1 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P4-v2 supercont1.268: 887257-887317 [-] Ensembl
Mir-2-P3 supercont1.268: 888595-888663 [-] Ensembl
Mir-2-P2b supercont1.268: 888744-888807 [-] Ensembl
Mir-2-P1-v1 supercont1.268: 889091-889155 [-] Ensembl
Mir-2-P1-v2 supercont1.268: 889091-889155 [-] Ensembl
Mir-71 supercont1.268: 889383-889449 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AACCAGAACCUGUGUCCAGUCGUGAUCGGAUCGUAAAAAUGGUUGUGCUGUGUUGUUACGCUCGAAAUUCAUAUCACAGCCAUUUUGACGAGUUCGAUCCUGGAUCGUUAUAGUCGCCUUCGUC
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Structure
        10          20        30         40        50        60 
AACCAGAACCUGUGUCCAG--   U       -|   A            C    UUGUUACG 
                     UCG GAUCGGA UCGU AAAAUGGUUGUG UGUG        \
                     GGU CUAGCUU AGCA UUUUACCGACAC AUAC        C
CUGCUUCCGCUGAUAUUGCUA   C       G^   G            U    UUAAAGCU 
  120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ge Ge So So To To To
Star sequence

Aae-Mir-2-P2b_5p*

mirBase accessionMIMAT0014255
Sequence
0- UCGUAAAAAUGGUUGUGCUGUG -22
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Mature sequence

Aae-Mir-2-P2b_3p

mirBase accessionMIMAT0014256
Sequence
41- UAUCACAGCCAUUUUGACGAGUU -64
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