MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-33-P14

Family name MIR-33 (all species)
Seed UGCAUUG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-33-P12  Lpo-Mir-33-P13 
Orthologues Aae-Mir-33  Aga-Mir-33  Ava-Mir-33  Bge-Mir-33  Cin-Mir-33  Csc-Mir-33  Cte-Mir-33  Dan-Mir-33  Dgr-Mir-33  Dlo-Mir-33  Dma-Mir-33  Dme-Mir-33  Dmo-Mir-33  Dpu-Mir-33  Dsi-Mir-33  Dya-Mir-33  Eba-Mir-33  Ebu-Mir-33  Efe-Mir-33  Egr-Mir-33  Esc-Mir-33  Gpa-Mir-33  Gsp-Mir-33  Hru-Mir-33  Isc-Mir-33  Lgi-Mir-33  Llo-Mir-33  Mgi-Mir-33  Mom-Mir-33  Npo-Mir-33  Obi-Mir-33  Ofu-Mir-33  Ovu-Mir-33  Pau-Mir-33  Pca-Mir-33  Pcr-Mir-33  Pdu-Mir-33  Pfl-Mir-33  Pmi-Mir-33  Sko-Mir-33  Snu-Mir-33  Spu-Mir-33  Tca-Mir-33  War-Mir-33  Xbo-Mir-33 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665791.1: 314621-314678 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CACCUUUCUGUAGGUAAGAGUGGUACUGUGGUGCAUUGUAGUUGCAUUGCAUGUUUAUUUGUUAAUGCAGUGCAUCGGCAGUGCAAACACAGAAUCAUAAGUAUGUCAUCGAUGUGAA
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Structure
        10         20        30         40        50        
CACCUUUCUGUAGGUAAGA-     A     G-|       AGU         UGUUUA 
                    GUGGU CUGUG  UGCAUUGU   UGCAUUGCA      U
                    UACUA GACAC  ACGUGACG   ACGUGACGU      U
AAGUGUAGCUACUGUAUGAA     A     AA^       GCU         AAUUGU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ge Ge So So So To
Mature sequence

Lpo-Mir-33-P14_5p
mirBase accessionNone
Sequence 
0- GUGCAUUGUAGUUGCAUUGCA -21
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Star sequence

Lpo-Mir-33-P14_3p*
mirBase accessionNone
Sequence 
37- CAGUGCAUCGGCAGUGCAAAC -58
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