MirGeneDB 3.0
MirGeneDB ID

Lpo-Bantam-P13

Family name BANTAM (all species)
Seed GAGAUCA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Bantam-P10  Lpo-Bantam-P11  Lpo-Bantam-P12  Lpo-Bantam-P14  Lpo-Bantam-P15 
Orthologues Aae-Bantam  Aga-Bantam  Agr-Bantam  Bge-Bantam  Bko-Bantam  Bpl-Bantam  Cte-Bantam  Dan-Bantam  Dgr-Bantam  Dlo-Bantam  Dma-Bantam  Dme-Bantam  Dmo-Bantam  Dpu-Bantam  Dsi-Bantam  Dya-Bantam  Eba-Bantam  Esc-Bantam  Gpa-Bantam  Gsa-Bantam  Gsp-Bantam  Hme-Bantam  Hru-Bantam  Lan-Bantam  Lgi-Bantam  Lhy-Bantam  Llo-Bantam  Mgi-Bantam  Mom-Bantam  Nag-Bantam  Npo-Bantam  Ofu-Bantam  Ovu-Bantam  Pau-Bantam  Pcr-Bantam  Ple-Bantam  Pve-Bantam  Sma-Bantam  Sne-Bantam  Snu-Bantam  Tca-Bantam  Tur-Bantam  War-Bantam 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013670185.1: 24874-24934 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GCUACACUUUUUCAAGUUUGUUGGACAAAAUUGGCUUUUACAUUGAUUUCCCAGAUGGAUUAGACUUCUGAGAUCAUUGUGAAAGCUGAUUUUGUUAUCCUGUCGACGUUAUGGAUCACGU
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Structure
        10        20          30        40        50          
GCUACACUUUUUCAAGUUUGUUG--|       UG         U       CCAGAUGGA 
                         GACAAAAU  GCUUUUACA UGAUUUC         \
                         UUGUUUUA  CGAAAGUGU ACUAGAG         U
UGCACUAGGUAUUGCAGCUGUCCUA^       GU         U       UCUUCAGAU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Bantam-P13_5p*
mirBase accessionNone
Sequence 
0- UUGGCUUUUACAUUGAUUUCCCA -23
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Mature sequence

Lpo-Bantam-P13_3p
mirBase accessionNone
Sequence 
38- UGAGAUCAUUGUGAAAGCUGAUU -61
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