| MirGeneDB ID | Bge-Bantam |
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| Family name |
BANTAM (all species) |
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| Seed |
GAGAUCA |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Bantam
Asu-Bantam-o1
Asu-Bantam-o2
Asu-Bantam-o3
Bpl-Bantam
Cbr-Bantam-P1a
Cbr-Bantam-P1b
Cbr-Bantam-P2
Cbr-Bantam-P3
Cbr-Bantam-P4
Cel-Bantam-P1
Cel-Bantam-P2
Cel-Bantam-P3
Cel-Bantam-P4
Cel-Bantam-P5a
Cel-Bantam-P5b
Cel-Bantam-P5c
Cgi-Bantam
Csc-Bantam-P16
Csc-Bantam-P17
Cte-Bantam
Dan-Bantam
Dma-Bantam
Dme-Bantam
Dmo-Bantam
Dpu-Bantam
Dsi-Bantam
Dya-Bantam
Efe-Bantam-P6
Efe-Bantam-P7
Efe-Bantam-P8
Esc-Bantam
Hme-Bantam
Isc-Bantam-P9a
Isc-Bantam-P9b
Lan-Bantam
Lgi-Bantam
Lpo-Bantam-P10
Lpo-Bantam-P11
Lpo-Bantam-P12
Lpo-Bantam-P13
Lpo-Bantam-P14
Lpo-Bantam-P15
Npo-Bantam
Ovu-Bantam
Sme-Bantam-P18
Sme-Bantam-P19
Sme-Bantam-P20
Tca-Bantam
|
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| Node of Origin (locus) |
Protostomia
|
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| Node of Origin (family) |
Protostomia
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Genome context
(Bger_2.0) |
KZ614636.1: 591905-591964 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUACAGCAUCUGCCAAGCCAUGAGACGAAGCCGGUUUUCACAGUGAUUUGCCAGAUAUGUUAAAUUCUGAGAUCAUUGUGAAAGCUGAUUUUGUUGAGUAGCUCUUCAGGAAAGCAGCAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUACAGCAUCUGCCAAGCC--| GA GC GC UAUG
AU GACGAA CGGUUUUCACAGUGAUUU CAGA U
UG UUGUUU GUCGAAAGUGUUACUAGA GUCU U
CACGACGAAAGGACUUCUCGA^ AG UA -- UAAA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Star sequence |
Bge-Bantam_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CCGGUUUUCACAGUGAUUUGCCAGA -25
Get sequence
|
|---|
| Mature sequence |
Bge-Bantam_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UGAGAUCAUUGUGAAAGCUGAUU -60
Get sequence
|
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