MirGeneDB 2.1

MirGeneDB ID

Efe-Bantam-P6

Family name BANTAM (all species)
Seed GAGAUCA
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Bantam-P7  Efe-Bantam-P8 
Orthologues Aae-Bantam  Bge-Bantam  Bpl-Bantam  Cgi-Bantam  Cte-Bantam  Dan-Bantam  Dma-Bantam  Dme-Bantam  Dmo-Bantam  Dpu-Bantam  Dsi-Bantam  Dya-Bantam  Esc-Bantam  Hme-Bantam  Lan-Bantam  Lgi-Bantam  Npo-Bantam  Ovu-Bantam  Tca-Bantam 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)
Efet.01.59348: 454-515 [+]
Precursor
(pre-Mir +30nt flank)
AAAGCGGAUAAAAGCCGAUGCAAACGGAACAGGUUUUCACAUUGAUUAUGCAGAUAGCACUAGAUAAAUCUGAGAUCAUUGUGAAAACUUAUUGCGUACCACGACGCCAGGGAUCGAGAAGC
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Structure
        10        20          30        40        50        60 
AAAGCGGAUAAAAGCCGAUGCAA--|  G  C           U     AUG    UAGCAC 
                         ACG AA AGGUUUUCACA UGAUU   CAGA      U
                         UGC UU UUCAAAAGUGU ACUAG   GUCU      A
CGAAGAGCUAGGGACCGCAGCACCA^  G  A           U     A--    AAAUAG 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Star sequence

Efe-Bantam-P6_5p*

mirBase accessionNone
Sequence
0- AGGUUUUCACAUUGAUUAUGCAGA -24
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Mature sequence

Efe-Bantam-P6_3p

mirBase accessionNone
Sequence
40- UGAGAUCAUUGUGAAAACUUAU -62
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