MirGeneDB 3.0

MirGeneDB ID

Csc-Bantam-P17

Family name BANTAM (all species)
Seed GAGAUCA
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Bantam-P16 
Orthologues Aae-Bantam  Aga-Bantam  Agr-Bantam  Bge-Bantam  Bko-Bantam  Bpl-Bantam  Cte-Bantam  Dan-Bantam  Dgr-Bantam  Dlo-Bantam  Dma-Bantam  Dme-Bantam  Dmo-Bantam  Dpu-Bantam  Dsi-Bantam  Dya-Bantam  Eba-Bantam  Esc-Bantam  Gpa-Bantam  Gsa-Bantam  Gsp-Bantam  Hme-Bantam  Hru-Bantam  Lan-Bantam  Lgi-Bantam  Lhy-Bantam  Llo-Bantam  Mgi-Bantam  Mom-Bantam  Nag-Bantam  Npo-Bantam  Ofu-Bantam  Ovu-Bantam  Pau-Bantam  Pcr-Bantam  Ple-Bantam  Pve-Bantam  Sma-Bantam  Sne-Bantam  Snu-Bantam  Tca-Bantam  Tur-Bantam  War-Bantam 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Protostomia
Genome context
(GCF_000671375.1_CSC)
NW_019384376.1: 788122-788182 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CCACCCCCGAAAGGAGCCGUUCGGACAAAACUGGUUUUCACAAUGGUCCUCCAGACGUAGAGGAAAUCUGAGAUCAUUGUGAAAGCUGAUUUUGUUGCAAAUGGCGACAAUGUGGCGUAAU
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Structure
        10         20         30        40        50        60
CCACCCCCGAAAGGAGC-    CG-|      CU                C  CAGACGUA 
                  CGUU   GACAAAA  GGUUUUCACAAUGGUC UC        G
                  GUAA   UUGUUUU  UCGAAAGUGUUACUAG AG        A
UAAUGCGGUGUAACAGCG    ACG^      AG                -  UCUAAAGG 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Bantam-P17_5p*

mirBase accessionNone
Sequence
0- CUGGUUUUCACAAUGGUCCUCCA -23
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Mature sequence

Csc-Bantam-P17_3p

mirBase accessionNone
Sequence
38- UGAGAUCAUUGUGAAAGCUGAUU -61
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