MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-277-P17

Family name MIR-277 (all species)
Seed AAAUGCA
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-277-P12  Lpo-Mir-277-P13  Lpo-Mir-277-P14  Lpo-Mir-277-P15  Lpo-Mir-277-P16 
Orthologues Aae-Mir-277  Aga-Mir-277  Agr-Mir-277  Bge-Mir-277  Bko-Mir-277  Bpl-Mir-277  Cel-Mir-277  Dan-Mir-277  Dlo-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Eba-Mir-277  Efe-Mir-277  Esc-Mir-277  Gpa-Mir-277  Gsp-Mir-277  Hme-Mir-277  Hru-Mir-277  Isc-Mir-277  Lgi-Mir-277  Llo-Mir-277  Mgi-Mir-277  Mom-Mir-277  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Pau-Mir-277  Pca-Mir-277  Pcr-Mir-277  Pdu-Mir-277  Pve-Mir-277  Rph-Mir-277  Sne-Mir-277  Snu-Mir-277  Tca-Mir-277  Tur-Mir-277  War-Mir-277 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Protostomia
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013665692.1: 440255-440315 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GCUCUCAAAUCCUACGUGGCCUUCGUAGUCUCAUUCCAGCGGUGCGUUUCCACGUCCAGCUUCGUCUGUAAAUGCAUCACCUGGAAUGAGUGUACGUGUAGGUAUUCACUUCGUUGUCCAU
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Structure
        10        20          30        40         50         
GCUCUCAAAUCCUACGUG    U--    GU          C-|        C  CGUCCA 
                  GCCU   CGUA  CUCAUUCCAG  GGUGCGUUU CA      G
                  UGGA   GCAU  GAGUAAGGUC  CUACGUAAA GU      C
UACCUGUUGCUUCACUUA    UGU    GU          CA^        U  CUGCUU 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Star sequence

Lpo-Mir-277-P17_5p* (predicted)
mirBase accessionNone
Sequence 
0- UCAUUCCAGCGGUGCGUUUCCA -22
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Mature sequence

Lpo-Mir-277-P17_3p
mirBase accessionNone
Sequence 
38- UAAAUGCAUCACCUGGAAUGAGU -61
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