MirGeneDB 2.1
MirGeneDB ID

Lpo-Mir-252-P1c

Family name MIR-252 (all species)
Seed UAAGUAG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-252-P1e  Lpo-Mir-252-P1f  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d 
Orthologues Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Cgi-Mir-252-P1  Csc-Mir-252-P1  Cte-Mir-252-P1  Dma-Mir-252-P1-v1  Dma-Mir-252-P1-v2  Dpu-Mir-252-P1  Esc-Mir-252-P1  Hme-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Npo-Mir-252-P1  Obi-Mir-252-P1  Ovu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Sko-Mir-252-P1  Spu-Mir-252-P1  Tca-Mir-252-P1 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013676376.1: 8410-8468 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGUUUUAACAUUCUUUGACGUUUCGCCUACUAAGUAGUGGUGCCGCAGGUAAUAAUGGUAAUGUUUACUUGCACACAACUGCUUAAUAGGUCAGACGAGUAGCCAUCUGUGGGUCAGA
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Structure
        10          20        30        40        50         
UUGUUUUAACAUUCUUUGA--|    C     C        G   CC        UAAUG 
                     CGUUU GCCUA UAAGUAGU GUG  GCAGGUAA     G
                     GCAGA UGGAU AUUCGUCA CAC  CGUUCAUU     U
AGACUGGGUGUCUACCGAUGA^    C     A        A   A-        UGUAA 
       110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Fe Fe Fe Ma Ma To
Mature sequence

Lpo-Mir-252-P1c_5p
mirBase accessionNone
Sequence 
0- CUAAGUAGUGGUGCCGCAGGUAA -23
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Star sequence

Lpo-Mir-252-P1c_3p* (predicted)
mirBase accessionNone
Sequence 
37- ACUUGCACACAACUGCUUAAUA -59
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