MirGeneDB 3.0
MirGeneDB ID

Lpo-Mir-252-P1f

Family name MIR-252 (all species)
Seed UAAGUAG
Species Atlantic horseshoe crab (Limulus polyphemus)
MiRBase ID
Paralogues Lpo-Mir-252-P1c  Lpo-Mir-252-P1e  Lpo-Mir-252-P2c  Lpo-Mir-252-P2d 
Orthologues Agr-Mir-252-P1  Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Cte-Mir-252-P1  Dgr-Mir-252-P1  Dlo-Mir-252-P1  Dma-Mir-252-P1  Dpu-Mir-252-P1  Eba-Mir-252-P1  Esc-Mir-252-P1  Hme-Mir-252-P1  Hmi-Mir-252-P1  Hru-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Lhy-Mir-252-P1  Llo-Mir-252-P1  Mgi-Mir-252-P1  Mom-Mir-252-P1  Npo-Mir-252-P1  Obi-Mir-252-P1  Ofu-Mir-252-P1  Ovu-Mir-252-P1  Pau-Mir-252-P1  Pca-Mir-252-P1  Pdu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Rph-Mir-252-P1  Sko-Mir-252-P1  Snu-Mir-252-P1  Spu-Mir-252-P1  Tca-Mir-252-P1  Tur-Mir-252-P1  War-Mir-252-P1 
Node of Origin (locus) L. polyphemus
Node of Origin (family) Bilateria
Genome context
(GCF_000517525.1_Limulus_polyphemus-2.1.2_genomic)		 NW_013667872.1: 190935-190993 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCUUAAGAUUUUAUUGACGUUGUGCCUAUUAAGUAGUUGUGCCGCAGGUAAUGAUGUUGGUGCUUACGUGCGUAUGACUACUUAACAGGCCAAACGAAUCACCAUCUCUACAGUGAU
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Structure
        10          20        30        40        50         
UAUCUUAAGAUUUUAUUGA--|   GU    A         UG   C   G    UGAUG 
                     CGUU  GCCU UUAAGUAGU  UGC GCA GUAA     U
                     GCAA  CGGA AAUUCAUCA  AUG CGU CAUU     U
UAGUGACAUCUCUACCACUAA^   AC    C         GU   -   G    CGUGG 
       110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So So To
Mature sequence

Lpo-Mir-252-P1f_5p
mirBase accessionNone
Sequence 
0- UUAAGUAGUUGUGCCGCAGGUAA -23
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Star sequence

Lpo-Mir-252-P1f_3p* (predicted)
mirBase accessionNone
Sequence 
37- ACGUGCGUAUGACUACUUAACA -59
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