MirGeneDB 3.0
MirGeneDB ID

Lgi-Mir-252-P1

Family name MIR-252 (all species)
Seed UAAGUAG
Species Owl limpet (Lottia gigantea)
MiRBase ID lgi-mir-252b
Paralogues Lgi-Mir-252-P2 
Orthologues Agr-Mir-252-P1  Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Csc-Mir-252-P1k  Csc-Mir-252-P1l  Cte-Mir-252-P1  Dan-Mir-252-P1a  Dan-Mir-252-P1b  Dgr-Mir-252-P1  Dlo-Mir-252-P1  Dma-Mir-252-P1  Dme-Mir-252-P1a  Dme-Mir-252-P1b  Dmo-Mir-252-P1a  Dmo-Mir-252-P1b  Dpu-Mir-252-P1  Dsi-Mir-252-P1a  Dsi-Mir-252-P1b  Dya-Mir-252-P1a  Dya-Mir-252-P1b  Eba-Mir-252-P1  Esc-Mir-252-P1  Hme-Mir-252-P1  Hmi-Mir-252-P1  Hru-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lhy-Mir-252-P1  Llo-Mir-252-P1  Lpo-Mir-252-P1c  Lpo-Mir-252-P1e  Lpo-Mir-252-P1f  Mgi-Mir-252-P1  Mom-Mir-252-P1  Npo-Mir-252-P1  Obi-Mir-252-P1  Ofu-Mir-252-P1  Ovu-Mir-252-P1  Pau-Mir-252-P1  Pca-Mir-252-P1  Pdu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Rph-Mir-252-P1  Sko-Mir-252-P1  Snu-Mir-252-P1  Spu-Mir-252-P1  Sro-Mir-252-P1o1  Sro-Mir-252-P1o2  Tca-Mir-252-P1  Tur-Mir-252-P1  War-Mir-252-P1  Xbo-Mir-252-P1g  Xbo-Mir-252-P1h  Xbo-Mir-252-P1i  Xbo-Mir-252-P1j 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Lotgi1)		 LOTGIsca_150: 486133-486191 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-252-P1)		 Mir-252-P2 LOTGIsca_150: 483957-484016 [-] Ensembl
Mir-252-P1 LOTGIsca_150: 486133-486191 [-] Ensembl
Mir-2001 LOTGIsca_150: 486301-486357 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUGUGAAGGUUGUUGUCUGUCAUGGUAACUAUAAGUAGUGGUGCCGCAGGUAUGAUAUUGAUGGCUACCUGCUUCAUCACUAUUUACUGUUAAUCUGAUAAUGUCACCAAGAUGGAGUU
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Structure
        10          20        30        40        50         
AUGUGAAGGUUGUUGUC--|    UGG    UA            CC       UGAUAU 
                   UGUCA   UAAC  UAAGUAGUGGUG  GCAGGUA      \
                   AUAGU   AUUG  AUUUAUCACUAC  CGUCCAU      U
UUGAGGUAGAACCACUGUA^    CUA    UC            UU       CGGUAG 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Lgi-Mir-252-P1_5p (predicted)
mirBase accessionMIMAT0009682
Sequence 
0- AUAAGUAGUGGUGCCGCAGGUA -22
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Star sequence

Lgi-Mir-252-P1_3p* (predicted)
mirBase accessionNone
Sequence 
37- CCUGCUUCAUCACUAUUUACUG -59
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