MirGeneDB 3.0
MirGeneDB ID

Xbo-Mir-252-P1g

Family name MIR-252 (all species)
Seed UAAGUAG
Species Xenoturbella (Xenoturbella bocki)
MiRBase ID
Paralogues Xbo-Mir-252-P1h  Xbo-Mir-252-P1i  Xbo-Mir-252-P1j  Xbo-Mir-252-P2 
Orthologues Agr-Mir-252-P1  Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Cte-Mir-252-P1  Dgr-Mir-252-P1  Dlo-Mir-252-P1  Dma-Mir-252-P1  Dpu-Mir-252-P1  Eba-Mir-252-P1  Esc-Mir-252-P1  Hme-Mir-252-P1  Hmi-Mir-252-P1  Hru-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Lhy-Mir-252-P1  Llo-Mir-252-P1  Mgi-Mir-252-P1  Mom-Mir-252-P1  Npo-Mir-252-P1  Obi-Mir-252-P1  Ofu-Mir-252-P1  Ovu-Mir-252-P1  Pau-Mir-252-P1  Pca-Mir-252-P1  Pdu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Rph-Mir-252-P1  Sko-Mir-252-P1  Snu-Mir-252-P1  Spu-Mir-252-P1  Tca-Mir-252-P1  Tur-Mir-252-P1  War-Mir-252-P1 
Node of Origin (locus) X. bocki
Node of Origin (family) Bilateria
Genome context
(genome.xe)		 scaffold836: 42917-42972 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACAAAGAAGUUUGUUUUGGCGGUGGCCUCUCUAAGUAGUAGUGCCGCAGGUAAGAACGUAAAUUACCUGCACAUUGCUGCUUAUUCAGGACGCUGGCCCCAUUCUACGAAAAAAAA
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Structure
        10          20        30        40        50        
ACAAAGAAGUUUGUUUU-  -|    G   CUC            CC       AGAAC 
                  GG CGGUG CCU   UAAGUAGUAGUG  GCAGGUA     \
                  CC GUCGC GGA   AUUCGUCGUUAC  CGUCCAU     G
AAAAAAAAGCAUCUUACC  G^    A   CUU            A-       UAAAU 
    110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
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Mature sequence

Xbo-Mir-252-P1g_5p
mirBase accessionNone
Sequence 
0- CUAAGUAGUAGUGCCGCAGGUA -22
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Star sequence

Xbo-Mir-252-P1g_3p* (predicted)
mirBase accessionNone
Sequence 
35- CCUGCACAUUGCUGCUUAUUC -56
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