MirGeneDB 3.0
MirGeneDB ID

Hmi-Mir-252-P1

Family name MIR-252 (all species)
Seed UAAGUAG
Species Panther worm (Hofstenia miamia)
MiRBase ID
Paralogues
Orthologues Agr-Mir-252-P1  Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Csc-Mir-252-P1k  Csc-Mir-252-P1l  Cte-Mir-252-P1  Dan-Mir-252-P1a  Dan-Mir-252-P1b  Dgr-Mir-252-P1  Dlo-Mir-252-P1  Dma-Mir-252-P1  Dme-Mir-252-P1a  Dme-Mir-252-P1b  Dmo-Mir-252-P1a  Dmo-Mir-252-P1b  Dpu-Mir-252-P1  Dsi-Mir-252-P1a  Dsi-Mir-252-P1b  Dya-Mir-252-P1a  Dya-Mir-252-P1b  Eba-Mir-252-P1  Esc-Mir-252-P1  Hme-Mir-252-P1  Hru-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Lhy-Mir-252-P1  Llo-Mir-252-P1  Lpo-Mir-252-P1c  Lpo-Mir-252-P1e  Lpo-Mir-252-P1f  Mgi-Mir-252-P1  Mom-Mir-252-P1  Npo-Mir-252-P1  Obi-Mir-252-P1  Ofu-Mir-252-P1  Ovu-Mir-252-P1  Pau-Mir-252-P1  Pca-Mir-252-P1  Pdu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Rph-Mir-252-P1  Sko-Mir-252-P1  Snu-Mir-252-P1  Spu-Mir-252-P1  Sro-Mir-252-P1o1  Sro-Mir-252-P1o2  Tca-Mir-252-P1  Tur-Mir-252-P1  War-Mir-252-P1  Xbo-Mir-252-P1g  Xbo-Mir-252-P1h  Xbo-Mir-252-P1i  Xbo-Mir-252-P1j 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Hofstenia_miamia.HmiaM1.dna.nonchromosomal)		 SCFE01000002.1: 3293755-3293810 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAACACCUUCAAAUUAUACACAUGUUUCUGUUAAGUAGUUGUGCCGCGGGUAAUUAUUGAAAUUACCUGGGCUUGAUUACUUAUCAAAAAGAAGAUCCUCGAAUUAAAGUAAGUUG
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Structure
        10        20        30            40        50        
UAACACCUUCAAAUUAUACACAUG     GU----|         U   G       UUAU 
                        UUUCU      UAAGUAGUUG GCC CGGGUAA    \
                        GAAGA      AUUCAUUAGU CGG GUCCAUU    U
GUUGAAUGAAAUUAAGCUCCUA--     AAAACU^         U   -       AAAG 
    110       100          90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Ho Ho
Mature sequence

Hmi-Mir-252-P1_5p
mirBase accessionNone
Sequence 
0- UUAAGUAGUUGUGCCGCGGGUAA -23
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Star sequence

Hmi-Mir-252-P1_3p* (predicted)
mirBase accessionNone
Sequence 
34- ACCUGGGCUUGAUUACUUAUCA -56
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