MirGeneDB ID | Csc-Mir-252-P1l |
Family name |
MIR-252 (all species) |
Seed |
UAAGUAG |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Mir-252-P1k
Csc-Mir-252-P2k
Csc-Mir-252-P2l-v1
Csc-Mir-252-P2l-v2
|
Orthologues |
Agr-Mir-252-P1
Asu-Mir-252-P1
Bfl-Mir-252-P1-v1
Bfl-Mir-252-P1-v2
Bge-Mir-252-P1
Bla-Mir-252-P1-v1
Bla-Mir-252-P1-v2
Cbr-Mir-252-P1
Cel-Mir-252-P1
Cte-Mir-252-P1
Dgr-Mir-252-P1
Dlo-Mir-252-P1
Dma-Mir-252-P1
Dpu-Mir-252-P1
Eba-Mir-252-P1
Esc-Mir-252-P1
Hme-Mir-252-P1
Hmi-Mir-252-P1
Hru-Mir-252-P1
Isc-Mir-252-P1
Lan-Mir-252-P1
Lgi-Mir-252-P1
Lhy-Mir-252-P1
Llo-Mir-252-P1
Mgi-Mir-252-P1
Mom-Mir-252-P1
Npo-Mir-252-P1
Obi-Mir-252-P1
Ofu-Mir-252-P1
Ovu-Mir-252-P1
Pau-Mir-252-P1
Pca-Mir-252-P1
Pdu-Mir-252-P1
Pfl-Mir-252-P1
Pmi-Mir-252-P1
Rph-Mir-252-P1
Sko-Mir-252-P1
Snu-Mir-252-P1
Spu-Mir-252-P1
Tca-Mir-252-P1
Tur-Mir-252-P1
War-Mir-252-P1
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_000671375.1_CSC) |
NW_019387483.1: 7658-7716 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGAGAUGCUACAAUGUUUCGGUUCUGCCUUCUAAGUAGUCUUGCCGCAGGUGACAUUUGAAUUAUUUACCUGCACACGACUACUUAUGAGGUUGAACUAGUUCCUAAUCGGCGAAAAUG
Get precursor sequence
|
Structure | 10 20 30 40 50
AGAGAUGCUACAAUGUUUC--| U C U CC CAUUU
GGUUC GCCUU UAAGUAGUC UG GCAGGUGA G
UCAAG UGGAG AUUCAUCAG AC CGUCCAUU A
GUAAAAGCGGCUAAUCCUUGA^ U U C A- UAUUA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Csc-Mir-252-P1l_5p |
mirBase accession | None |
Sequence |
0- CUAAGUAGUCUUGCCGCAGGUGA -23
Get sequence
|
Star sequence |
Csc-Mir-252-P1l_3p* |
mirBase accession | None |
Sequence |
37- ACCUGCACACGACUACUUAUGA -59
Get sequence
|