MirGeneDB 3.0
MirGeneDB ID

Eba-Mir-252-P1

Family name MIR-252 (all species)
Seed UAAGUAG
Species Epimenia (Solenogaster) (Epimenia babai)
MiRBase ID
Paralogues Eba-Mir-252-P2 
Orthologues Agr-Mir-252-P1  Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Csc-Mir-252-P1k  Csc-Mir-252-P1l  Cte-Mir-252-P1  Dan-Mir-252-P1a  Dan-Mir-252-P1b  Dgr-Mir-252-P1  Dlo-Mir-252-P1  Dma-Mir-252-P1  Dme-Mir-252-P1a  Dme-Mir-252-P1b  Dmo-Mir-252-P1a  Dmo-Mir-252-P1b  Dpu-Mir-252-P1  Dsi-Mir-252-P1a  Dsi-Mir-252-P1b  Dya-Mir-252-P1a  Dya-Mir-252-P1b  Esc-Mir-252-P1  Hme-Mir-252-P1  Hmi-Mir-252-P1  Hru-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Lhy-Mir-252-P1  Llo-Mir-252-P1  Lpo-Mir-252-P1c  Lpo-Mir-252-P1e  Lpo-Mir-252-P1f  Mgi-Mir-252-P1  Mom-Mir-252-P1  Npo-Mir-252-P1  Obi-Mir-252-P1  Ofu-Mir-252-P1  Ovu-Mir-252-P1  Pau-Mir-252-P1  Pca-Mir-252-P1  Pdu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Rph-Mir-252-P1  Sko-Mir-252-P1  Snu-Mir-252-P1  Spu-Mir-252-P1  Sro-Mir-252-P1o1  Sro-Mir-252-P1o2  Tca-Mir-252-P1  Tur-Mir-252-P1  War-Mir-252-P1  Xbo-Mir-252-P1g  Xbo-Mir-252-P1h  Xbo-Mir-252-P1i  Xbo-Mir-252-P1j 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_011762755.2_ASM1176275v2_Epimenia)		 WURV02153403.1: 4978-5037 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CACGCGACACCAUCAAUGUACCGAUUGUGUCUAAGUAGUAGUGCCGCAGGUACGUGAUUUAACAGGCUACCUGCGCCCUGCUCCUUACCCACCUCGGUUACAUCGCCCCAAGGUGACGUC
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Structure
        10           20        30        40        50          
CACGCGACACCAUCAAU--  -|    UU   UC    U     U  C       CGUGAUU 
                   GU ACCGA  GUG  UAAG AGUAG GC GCAGGUA       \
                   CA UGGCU  CAC  AUUC UCGUC CG CGUCCAU       U
CUGCAGUGGAACCCCGCUA  U^    C-   CC    C     C  -       CGGACAA 
.       110       100         90        80         70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ch
Mature sequence

Eba-Mir-252-P1_5p
mirBase accessionNone
Sequence 
0- CUAAGUAGUAGUGCCGCAGGUA -22
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Star sequence

Eba-Mir-252-P1_3p* (predicted)
mirBase accessionNone
Sequence 
39- CCUGCGCCCUGCUCCUUACCC -60
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