MirGeneDB 3.0
MirGeneDB ID

Sro-Mir-252-P1o1

Family name MIR-252 (all species)
Seed AAGUAGU
Species Roscoff worm (Symsagittifera roscoffensis)
MiRBase ID
Paralogues Sro-Mir-252-P1o2 
Orthologues Agr-Mir-252-P1  Asu-Mir-252-P1  Bfl-Mir-252-P1-v1  Bfl-Mir-252-P1-v2  Bge-Mir-252-P1  Bla-Mir-252-P1-v1  Bla-Mir-252-P1-v2  Cbr-Mir-252-P1  Cel-Mir-252-P1  Cte-Mir-252-P1  Dgr-Mir-252-P1  Dlo-Mir-252-P1  Dma-Mir-252-P1  Dpu-Mir-252-P1  Eba-Mir-252-P1  Esc-Mir-252-P1  Hme-Mir-252-P1  Hmi-Mir-252-P1  Hru-Mir-252-P1  Isc-Mir-252-P1  Lan-Mir-252-P1  Lgi-Mir-252-P1  Lhy-Mir-252-P1  Llo-Mir-252-P1  Mgi-Mir-252-P1  Mom-Mir-252-P1  Npo-Mir-252-P1  Obi-Mir-252-P1  Ofu-Mir-252-P1  Ovu-Mir-252-P1  Pau-Mir-252-P1  Pca-Mir-252-P1  Pdu-Mir-252-P1  Pfl-Mir-252-P1  Pmi-Mir-252-P1  Rph-Mir-252-P1  Sko-Mir-252-P1  Snu-Mir-252-P1  Spu-Mir-252-P1  Tca-Mir-252-P1  Tur-Mir-252-P1  War-Mir-252-P1 
Node of Origin (locus) S. roscoffensis
Node of Origin (family) Bilateria
Genome context
(GCA_025153585.1_SymRos_1_5_genomic)		 JANVAR010002596.1: 7130-7210 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUCGUGUUUAUUGUGGGAUGAGAUCGAUUAAGUAGUUCUGCCAUAGGUAAUUGAUUAAUCCCUCUGAAGGGAUAAAGGAAGAAAAAUUACCUGUGUUGAGCUACUUCGCCGGUACCUUCCAUGAAACGUAACUUUUCAA
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Structure
        10          20        30        40        50        60        70
UUUUCGUGUUUAUUGUG--|  UGAG    AUU         UGC          UGAUUAAUCCCUCUGA 
                   GGA    AUCG   AAGUAGUUC   CAUAGGUAAU                A
                   CCU    UGGC   UUCAUCGAG   GUGUCCAUUA                G
AACUUUUCAAUGCAAAGUA^  UCCA    CGC         UU-          AAAAGAAGGAAAUAGG 
 .       130       120       110       100         90        80
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Po
Mature sequence

Sro-Mir-252-P1o1_5p
mirBase accessionNone
Sequence 
0- UAAGUAGUUCUGCCAUAGGUAAU -23
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Star sequence

Sro-Mir-252-P1o1_3p*
mirBase accessionNone
Sequence 
59- UACCUGUGUUGAGCUACUUCGC -81
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